Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4984 |
Symbol | deoB |
ID | 6872223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4813236 |
End bp | 4814459 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787854 |
Product | phosphopentomutase |
Protein accession | YP_002218444 |
Protein GI | 198241842 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 100 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGTG CATTTATTAT GGTGCTGGAC TCATTCGGCA TCGGCGCTAC TGAAGACGCG GATCGTTTTG GCGACGTAGG TTCCGACACT CTGGGCCACA TCGCAGAAGC TTGCGCCAAA GGCGAAGCTG ACAATGGCCG TAAAGGCCCG TTGAATCTGC CTAACCTGAC TCGTCTGGGG CTGGTGAAAG CGCATGAAGG CTCTACCGGT AAAATTGCCG CCGGCATGGA CGGCAACGCG GACGTTATTG GCGCATACGC ATGGGCGCAC GAACTGTCCT CCGGCAAAGA TACGCCGTCA GGCCACTGGG AAATCGCCGG TGTGCCGGTA CTGTTCGACT GGGGCTATTT CAGCGACCAC GAAAACAGCT TCCCGCAGGA ACTGCTGGAT AAGCTGGTGA AACGCGCCAA CCTGCCGGGC TATCTCGGTA ACTGCCACTC TTCCGGCACC GTTATTCTGG ACCAGCTCGG CGAAGAGCAC ATGAAAACCG GCAAGCCGAT TTTCTACACC TCCGCTGACT CCGTGTTCCA GATTGCCTGC CACGAAGAGA CCTTTGGCCT GGATAAACTC TACGAGCTGT GCGAAATCGC CCGTGAAGAG CTGACCGTAG GCGGCTATAA CATTGGCCGC GTGATCGCGC GTCCGTTTAT CGGCGACAAG GCCGGTAACT TCCAGCGTAC CGGTAACCGT CACGACCTGG CCGTTGAACC GCCAGCGCCG ACCGTGCTGC AGAAACTGGT CGATGAAAAA CAGGGCCACG TGGTGTCCGT CGGTAAGATT GCCGACATCT ACGCCAACTG CGGCATCACT AAGAAAGTGA AAGCGACCGG TCTGGACGCG CTGTTCGACG CGACCCTCAA AGAGATGAAA GAAGCGGGCG ATAAAACCAT CGTTTTCACT AACTTCGTTG ACTTCGACTC TTCCTGGGGC CACCGTCGCG ACATCGCGGG CTACGCCGCA GGTCTGGAGC TGTTTGACCG CCGTCTGCCG GAGCTGATGG AGCTGGTGGG TGAAGATGAC ATTCTGATCC TGACCGCTGA CCACGGCTGT GACCCGAGCT GGACCGGTAC TGACCATACC CGTGAGCACA TTCCGGTGCT GATCTACGGT CCGAAAGTCA AACCGGGCTC TTTAGGTCAC CGTGAAACCT TCGCGGATAT CGGCCAGACG CTGGCGACCT ACTTTGGCAC ATCGCCGATG GACTACGGTA AAAACATGCT GTGA
|
Protein sequence | MKRAFIMVLD SFGIGATEDA DRFGDVGSDT LGHIAEACAK GEADNGRKGP LNLPNLTRLG LVKAHEGSTG KIAAGMDGNA DVIGAYAWAH ELSSGKDTPS GHWEIAGVPV LFDWGYFSDH ENSFPQELLD KLVKRANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC HEETFGLDKL YELCEIAREE LTVGGYNIGR VIARPFIGDK AGNFQRTGNR HDLAVEPPAP TVLQKLVDEK QGHVVSVGKI ADIYANCGIT KKVKATGLDA LFDATLKEMK EAGDKTIVFT NFVDFDSSWG HRRDIAGYAA GLELFDRRLP ELMELVGEDD ILILTADHGC DPSWTGTDHT REHIPVLIYG PKVKPGSLGH RETFADIGQT LATYFGTSPM DYGKNML
|
| |