Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4979 |
Symbol | |
ID | 6875158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4807508 |
End bp | 4808281 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642787849 |
Product | putative deoxyribonuclease YjjV |
Protein accession | YP_002218439 |
Protein GI | 198242234 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.305801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTGGC GCTTTATCGA TACGCATTGC CATTTTGATT TCCCGCCCTT TACGGGCGAT GAGCGCGCCA GTATTCAGCG TGCCTGTGAG GCGGGCGTTG AAAAAATCAT CGTGCCGGCG ACCGAGGCGG CTCACTTTCC CCGCGTGCTG GCGCTGGCGG CGCGTTTCCC GTCGCTTTAT GCTGCGCTGG GATTACACCC CATTGTGATT GAGCGTCATG CCGATGACGA TCCTGATAAG CTGCAACAAG CGCTGGCGCA ACAACAGAAC GTCGTGGCGG TAGGCGAGAT CGGGCTCGAT CTTTATCGCG ACGATCCGCA GTTTGCCAGG CAAGAGCGAT TTTTAGACGC GCAACTGCAA CTGGCAAAAC GCTACGATCT GCCGGTGATC CTGCACTCGC GGCGCACGCA TGACAAACTG GCGATGCACT TAAAGCGCCA GGATCTGCCG CGAACCGGTG TGGTGCATGG TTTTGCCGGC AGTCTGCAGC AGGCCGAACG CTTTGTGCGA CTGGGCTATA AAATCGGCGT CGGCGGCACC ATCACCTACC CGCGCGCCAG TAAAACCCGT GATGTTATGG CGCGGTTGCC GCTGGACGCG CTGTTGCTGG AGACCGATGC GCCGGATATG CCGCTAAAGG GGTTTCAGGG GCAGCCGAAC CGCCCGGAGC AGGCGGCGCG CGTATTTGAT GCGCTCTGCG AATTACGTCC GGAGCCCGCA GAGGTGATAG CCGATACGCT GTATCGCAAT ACCATTACCT TGTTTCGGCT CTGA
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Protein sequence | MSWRFIDTHC HFDFPPFTGD ERASIQRACE AGVEKIIVPA TEAAHFPRVL ALAARFPSLY AALGLHPIVI ERHADDDPDK LQQALAQQQN VVAVGEIGLD LYRDDPQFAR QERFLDAQLQ LAKRYDLPVI LHSRRTHDKL AMHLKRQDLP RTGVVHGFAG SLQQAERFVR LGYKIGVGGT ITYPRASKTR DVMARLPLDA LLLETDAPDM PLKGFQGQPN RPEQAARVFD ALCELRPEPA EVIADTLYRN TITLFRL
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