Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4962 |
Symbol | |
ID | 6870994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4796323 |
End bp | 4796997 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642787832 |
Product | DNA-binding transcriptional activator BglJ |
Protein accession | YP_002218425 |
Protein GI | 198242398 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.793457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACA GAATCAGCAA GAGAAATGTT GCGCTCGTAG AAAAATGCGT GATGAGCACC ATTGGTATTA AAGGGCTATT TGATGCAATG CCGGATTGCC GACATACGCT TCATATTTTT TCAAAACCAT CCACGTTTTA TAAGGCTGCG CTAAAGACGC CGTTTTCTGC CGTTATTTTT TCTCTTTCTG CGTTAAGAAC TGAACGCCGG ACAGGATTAT CCAGTCTGAC GGAACTGGCG ATAAATTATC CCCATATGCG GCGTCTGGTG ATTGCCGATG ATGATGCTGA AGCCCGCTTA ATCAGCGCGC TATCCCCGCT GCCGCTGGAT GGGGTCATCA GCAAAGCGTC GCCGTTGGAT GTTTTACAGG ATGCCTTATT TACATCGCTT AATAGCGCCC GGCGGACAAC GGAGCGTACA GACAATCTTT GGGAACTTCA CCAGAATTGT ATGCTTAGTC CAACCGAGCG GGAGATTCTG CGTTTCATGT CGAACGGCTA CTCAATGCCG CAAATTGCCG TCCAGTTAGA ACGTAACATT AAGACTATCC GGGCGCATAA GTTTAATGTG ATGTCCAAGC TGGGCGTGAG TTCTGATGCC GGGTTACTCG ATGCGGCGGA TATTCTGTTA TATCTGCGCG CCGGAGATGC TACCGCGCTC CAGCATCGGG TATAG
|
Protein sequence | MENRISKRNV ALVEKCVMST IGIKGLFDAM PDCRHTLHIF SKPSTFYKAA LKTPFSAVIF SLSALRTERR TGLSSLTELA INYPHMRRLV IADDDAEARL ISALSPLPLD GVISKASPLD VLQDALFTSL NSARRTTERT DNLWELHQNC MLSPTEREIL RFMSNGYSMP QIAVQLERNI KTIRAHKFNV MSKLGVSSDA GLLDAADILL YLRAGDATAL QHRV
|
| |