Gene SeD_A4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4874 
Symbol 
ID6874953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4724613 
End bp4724861 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content48% 
IMG OID642787757 
ProductAraC family transcriptional regulator 
Protein accessionYP_002218350 
Protein GI198246132 
COG category[K] Transcription 
COG ID[COG3905] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.62267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.00867489 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCTT CCGCTAAACA GACCATCAGC GCCCAGATTC CAGTTGAGTT GGCTGCTGCT 
GTTGAAAATC TGGCAATTGA GTTAGATCGT TCTAAGAGCT GGATTATTAA GGAAGCATTG 
ACCAGTATGC TGGCCGAAAG AGAACGGCGT CATCAGAGCA TCCAGGCCGG TCTTGCCGAT 
GTGGATGCTG GTCGTGTAGT GAGTCATTCG GATATGGTAG ATCTTGACAA CCGTTTAAAG 
GAAACCTGA
 
Protein sequence
MASSAKQTIS AQIPVELAAA VENLAIELDR SKSWIIKEAL TSMLAERERR HQSIQAGLAD 
VDAGRVVSHS DMVDLDNRLK ET