| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4791 |
|---|
| Symbol | |
|---|
| ID | 6873015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4644649 |
|---|
| End bp | 4645575 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642787682 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218276 |
|---|
| Protein GI | 198242021 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00231071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC AACGCCAGGC CTCCCCGTTT GCCCGCAAAA ACGTCGTTTA TGTGTGTGCC
GCATTTTGTT GCTTGCTATG GGGCAGCGCT TATCCAGCCA TCAAAAGCGG TTATGACCTC
TTTCAGATAG CCACCGATGA TATCCCTTCT AAAATTGTTT TTGCTGGTTA TCGTTTTTTG
TTTGCGGGTG GGTTGCTACT ACTGTTCGCG CTGCTTCAGC GTAAACCGAT TGGTCGGTTT
CGTCCGCGCC AGTTTGCTCA GTTGACGTTA CTGGGGCTGA CTCAGACGTC GCTGCAATAT
CTCTTTTTCT ATATCGGCCT TGCGTTCACC TCCGGCGTGA AAGGCTCAAT CATGAACGCG
ACAGGCACAT TCTTCAGCGT ATTGCTGGCG CACTTTATTT ATCAGAACGA CCGATTGAGC
TACAACAAAA CGCTCGGCTG TATTCTGGGC TTTGCGGGCG TCATGGTGGT GAACGTCAGC
AACGGCCTGG ATTTCAGCTT TAATCTGCCG GGAGAAGGCT CCGTGGTGCT GGCGGCGTTT
ATTCTTTCTG CGGCCACATT GTATGGCAAA CGTCTCTCGC AGACGGTCGA TCCGATGGTC
ATGACTGGCT ATCAATTGGG GATTGGCGGT CTGGTACTGG TCATTGGCGG TTACGTTTTT
GGCGGTACGC TGACGATACA TGGCTTCTCG TCGGTGGCGA TTTTAGTCTA CCTGACGCTG
CTCTCGTCGG TCGCTTTTGC GCTATGGAGC ATTTTACTCA AATATAATCG CGTGGGGATG
ATTGCGCCGT TTAACTTTCT GATCCCGGTT TCTGGCGCGG CTCTTTCGGC TATTTTTCTC
GGCGAGAATA TATTGGAGTG GAAATACATG ATTGCGCTGG TGCTGGTGTG TTCGGGGATT
TGGTGGGTGA ATAAGGTGAA GCGGTAA
|
|---|
| Protein sequence | MDTQRQASPF ARKNVVYVCA AFCCLLWGSA YPAIKSGYDL FQIATDDIPS KIVFAGYRFL
FAGGLLLLFA LLQRKPIGRF RPRQFAQLTL LGLTQTSLQY LFFYIGLAFT SGVKGSIMNA
TGTFFSVLLA HFIYQNDRLS YNKTLGCILG FAGVMVVNVS NGLDFSFNLP GEGSVVLAAF
ILSAATLYGK RLSQTVDPMV MTGYQLGIGG LVLVIGGYVF GGTLTIHGFS SVAILVYLTL
LSSVAFALWS ILLKYNRVGM IAPFNFLIPV SGAALSAIFL GENILEWKYM IALVLVCSGI
WWVNKVKR
|
|---|
| |