Gene SeD_A4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4782 
SymbolulaC 
ID6872309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4639510 
End bp4639974 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content55% 
IMG OID642787673 
ProductPTS system L-ascorbate-specific transporter subunit IIA 
Protein accessionYP_002218267 
Protein GI198242612 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.34657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC GTGATTCACT GGCGGAGAAT AATTCTATCC GCCTGCAGGC TGAAGCGAAT 
ACCTGGCAGG AAGCCGTCAA GATCGGCGTC GATTTACTGG TGGCTGCCGA CGTGGTGGAG
CCGCGCTATT ACCAGGCCAT TCTCGATGGC GTTGAGCAGT TTGGCCCCTA TTTTGTGATT
GCCCCCGGCC TGGCGATGCC GCATGGCCGC CCGGAAGAAG GGGTGAAGAA AACCGGTTTT
TCGCTGGTGA CGCTGAAAAA GCCGCTGGAG TTCAACCACG AAGATAACGA CCCGGTCGAT
ATTCTGATCA CCATGGCGGC GGTTGATGCC AACACTCACC AGGAAGTGGG CATCATGCAG
ATCGTCAACC TGTTTGAAGA CGAAGCTAAT TTTGACCGTT TACGCGCCTG CCGCACCGCG
CAGGAAGTCC TGGATCTCAT TGACCGCACC AACGCGGCAG CTTAA
 
Protein sequence
MKLRDSLAEN NSIRLQAEAN TWQEAVKIGV DLLVAADVVE PRYYQAILDG VEQFGPYFVI 
APGLAMPHGR PEEGVKKTGF SLVTLKKPLE FNHEDNDPVD ILITMAAVDA NTHQEVGIMQ
IVNLFEDEAN FDRLRACRTA QEVLDLIDRT NAAA