Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4761 |
Symbol | hflC |
ID | 6875195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4620228 |
End bp | 4621232 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787654 |
Product | FtsH protease regulator HflC |
Protein accession | YP_002218248 |
Protein GI | 198244529 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGT CAGTTATTGC GATTATCATC ATCGTGCTGG TAGTGCTCTA CATGTCCGTC TTTGTGGTCA AAGAGGGCGA GCGCGGCATT ACGCTGCGTT TTGGTAAAGT TCTGCGTGAC GATGAGAACA AACCGCTGGT TTACGCGCCG GGTCTGCACT TTAAGATCCC GTTTATTGAA TCAGTGAAAA TGCTTGATGC GCGTATCCAG ACGATGGATA ACCAGGCCGA TCGCTTTGTG ACTAAAGAGA AGAAAGACCT GATTGTCGAC TCCTACATCA AATGGCGTAT CAGCGACTTT AGCCGTTACT ATCTGGCGAC CGGCGGCGGC GATATTTCGC AAGCCGAAGT GCTGTTAAAA CGTAAGTTCT CGGACCGTTT GCGTTCTGAG ATTGGTCGCC TGGACGTAAA AGACATCGTG ACCGATTCTC GTGGTCGTCT GACTCTGGAG GTGCGCGACG CGCTGAACTC CGGTTCAGCC GGTACCGATG ATGAAGTAGC GACCCCGGCG GCGGATGATG CGATTGCCGA AGCGGCGGAA CGCGTCACGG CGGAAACCAA AGGTAAAGTA CCGGTCATCA ACCCGAACAG TATGGCGGCG TTGGGTATCG AAGTGGTCGA TGTGCGTATT AAGCAAATCA ACCTGCCGAC CGAGGTTTCT GAGGCGATTT ACAACCGTAT GCGCGCCGAG CGTGAAGCGG TCGCGCGTCG TCATCGTTCA CAAGGTCAGG AAGAAGCGGA AAAACTGCGT GCGGCTGCTG ACTATGAGGT GACGAAAACT CTGGCGGAAG CCGAGCGTCA GGGGCGTATC ATGCGTGGTG AAGGTGATGC TGAAGCCGCG AAGCTGTTTG CCGACGCGTT CAGCCAGGAC CCTGATTTCT ACGCGTTCAT TCGTAGTCTG CGCGCTTACG AGAAGAGCTT CGAAGGTAAT CAGGACGTGA TGGTACTGAG CCCGGACAGC GATTTCTTCC GCTACATGAA GACACCGAGT TCGACGACAC GCTAA
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Protein sequence | MRKSVIAIII IVLVVLYMSV FVVKEGERGI TLRFGKVLRD DENKPLVYAP GLHFKIPFIE SVKMLDARIQ TMDNQADRFV TKEKKDLIVD SYIKWRISDF SRYYLATGGG DISQAEVLLK RKFSDRLRSE IGRLDVKDIV TDSRGRLTLE VRDALNSGSA GTDDEVATPA ADDAIAEAAE RVTAETKGKV PVINPNSMAA LGIEVVDVRI KQINLPTEVS EAIYNRMRAE REAVARRHRS QGQEEAEKLR AAADYEVTKT LAEAERQGRI MRGEGDAEAA KLFADAFSQD PDFYAFIRSL RAYEKSFEGN QDVMVLSPDS DFFRYMKTPS STTR
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