Gene SeD_A4681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4681 
Symbol 
ID6872725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4543317 
End bp4544225 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content51% 
IMG OID642787580 
Productmembrane-bound beta-hydroxylase 
Protein accessionYP_002218178 
Protein GI198243921 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAG CAATCATTAT CGGTATTTTT ATTATCAGCG TCATTTATGC GCATTCACGC 
GGTGTGGAAA AACAAAAACT TTCCCGTCAA CTCTTTGACC ACTCGACGTT TATGGCGCCG
ATCAATATGT TCATGACTCG CTTCTCAACG TTACCGGCAA AGCAGCCGTA CTTTGATACC
ACGGCATTTC CAGAGCTGCA GAAGCTGACG GAAAACTGGC AGGTGATTCG TGAAGAGGCG
CTACGGCTTC AGCATCACAT AAAAGCCGCG CAGGCCAATA ACGACGCCGG ATTCAACACC
TTTTTCAAGC GCGGCTGGAA ACGGTTTTAC CTTAAATGGT ATTCCGATGC CCACCCGTCG
GCGGAAACGT TATGCCCGAT AACGACAAAG CTGGTCAACA GCATCCCCTC TATCAAAGCG
GCGATGTTCG CCGAGTTGCC TCCCGGAGCC TATCTGGGAA AACATCGCGA CCCCTATGCC
GGTTCAGTAC GTTACCATCT TGGATTAAGC ACACCGAATG ACGACCGCTG TTTTATTGAA
GTTGATCGAC AGCGCCATAG CTGGCGCGAC GGCGAAGCCG TCATCTTCGA CGAAACCTAC
GTTCATTGGG CGGAAAATAA AACTGAGCAG ACGCGTATTA TCCTCTTTTG CGATATTGAG
CGTCCAATGA AATGGCGCTG GGCGCAGAGC GTAAACCACT GGGTCGGCGC ATCGTTGATG
TCCGCCGCCA GTTCGCCAAA CGACGAGAAC GATCGCACCG GTGCGATTAA TCGCATCTTT
AAATACGTTC ATGCAGCACG CGATGCCGGG CAACGGCTGA AAAAGAAAAA CCGCACTCTC
TATTACGCGC TGAAATATCT CGTTATTGCC GCTATTTTTG CCGCGATAAT CCTTTTCAGC
CTCCTCTGA
 
Protein sequence
MFAAIIIGIF IISVIYAHSR GVEKQKLSRQ LFDHSTFMAP INMFMTRFST LPAKQPYFDT 
TAFPELQKLT ENWQVIREEA LRLQHHIKAA QANNDAGFNT FFKRGWKRFY LKWYSDAHPS
AETLCPITTK LVNSIPSIKA AMFAELPPGA YLGKHRDPYA GSVRYHLGLS TPNDDRCFIE
VDRQRHSWRD GEAVIFDETY VHWAENKTEQ TRIILFCDIE RPMKWRWAQS VNHWVGASLM
SAASSPNDEN DRTGAINRIF KYVHAARDAG QRLKKKNRTL YYALKYLVIA AIFAAIILFS
LL