Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4659 |
Symbol | |
ID | 6872009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4517840 |
End bp | 4519441 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642787560 |
Product | cyclic diguanylate phosphodiesterase (EAL) domain-containing protein |
Protein accession | YP_002218158 |
Protein GI | 198246041 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAA GCACACGACG CAAGGTGTTG AGATTTCTCG GAACGATCAT TGTGGTGTTA CTTCCTATAT TGCTGGCGAT CTGGTTTGCT CATATCCGGG CAGTCTCTGA AACCAGAAAT CAGTTACATT CATTTGCGCA GTTGGTATTA GATAAAACGG AGCGGGTTAT CCTGCAAGCA GATTTAGCCC GCGATGCCGC TGAACAATAT CAGGGGCAAG CCTGTACGCC AGCCCATCAA CAGCGAATGC TGAATATTAT CCGCGGTCGT TTGTACATTA ATGAGTTGAT TTATGCTAAG GGCCAGCGTT TTCTATGCTC TACGGTTATG ACGCCAACAA GTCCTTATTT TATTCCCCGC GCTGACTATA AACGAAAGCC TGACATCGCT ATTTATTACT ATCGTGATAC GCCTTTTTTC AACGGTTATA AAATGACATA TATGCAGCGG GGAAACTATG TCGCGGTTAT CAATCCCTTA TCTTATAGCG AGGTGATGTC AGACGATCCG GCGTTGGCCT GGGGAATGTA TGATACGGTG ACCAACACCT TTTTCTCCCT GAGTGAACAG GCGCAGGCTG ATCAGCTATT ACCTTTGGTA CGACGGAGTG AACCTGTGTT CCAACAGGGT GAGCGTTTTT ATACTCTGGT TAAATCAGCA AAACGACCGG TTGCCACGAT TGTTTCAACC TCAAAGCAAC GCTTTTACCA GAACCTCTTT CATCAGCTTA CGTTAACGCT ACCGTTAGGG ATCATCTGTA GCATTATCGT CTTATTTATG TGGTCACGAT CCCGGCAGGC ATATTACTCA CCGCGTCGAT TGCTGCAACG GGCCATTACC AGGCACCAGC TTTGCCTTCA TTATCAGCCG ATCATTGATA TCCGAAACGG GACATGTGTA GGTGCCGAAG CGCTATTGCG TTGGCCGGGC TATCACGGTC CGGTGATGAG CCCGTGCGAA TTTATTCCGC TGGCGGAAAA AGAGGGGATG ATTGAGCAGA TCACCGATTA TGTCGTCGAA GAGGTATTTA ATGATTTAGG TGGTTTTCTG GCCGCGCACC CGCATCTTTA TGTCTCTATC AATCTCTCTG CCGCTGATTT TCTCTCTTTC CGGCTAATTG TGATGATTCA TGAAAAAACG CGTCAGCATT CAGTGCTTGC GCAACAGATA AAAGTTGAAG TGACCGAGCG CGGATTTATT GATGTGCCTA AAATGACGCC GATTATTCAG GCGTTTCGCC AGGCGGGATA CGAGGTGGCA ATTGATGACT TTGGTACCGG CTATTCGAAC TTGCATAACC TGTACTCATT AAATGTCGAC CTTTTAAAAA TTGATAAATC TTTTGTCGAC ACGCTAACCA CTAATAGCGC CAGCCATTTG ATTGTGGAAC ATATTATTGA AATGGCGCAA AGTTTGCGGC TAAAAATCAT TGCTGAGGGG GTTGAAACGG CTGAACAGGT TAGCTGGTTG CTAAAACGCG GCGTTCAGTA TTGTCAGGGA TGGCACTTTG CGAAGGCGTT GCCACCGCAG GAATTCATCG CCTGGTTACA ACAAACGCCC GCGCCTCTGA CGATACGCGG GCAGAGGCCC TACAGGCGGT GA
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Protein sequence | MSQSTRRKVL RFLGTIIVVL LPILLAIWFA HIRAVSETRN QLHSFAQLVL DKTERVILQA DLARDAAEQY QGQACTPAHQ QRMLNIIRGR LYINELIYAK GQRFLCSTVM TPTSPYFIPR ADYKRKPDIA IYYYRDTPFF NGYKMTYMQR GNYVAVINPL SYSEVMSDDP ALAWGMYDTV TNTFFSLSEQ AQADQLLPLV RRSEPVFQQG ERFYTLVKSA KRPVATIVST SKQRFYQNLF HQLTLTLPLG IICSIIVLFM WSRSRQAYYS PRRLLQRAIT RHQLCLHYQP IIDIRNGTCV GAEALLRWPG YHGPVMSPCE FIPLAEKEGM IEQITDYVVE EVFNDLGGFL AAHPHLYVSI NLSAADFLSF RLIVMIHEKT RQHSVLAQQI KVEVTERGFI DVPKMTPIIQ AFRQAGYEVA IDDFGTGYSN LHNLYSLNVD LLKIDKSFVD TLTTNSASHL IVEHIIEMAQ SLRLKIIAEG VETAEQVSWL LKRGVQYCQG WHFAKALPPQ EFIAWLQQTP APLTIRGQRP YRR
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