Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4629 |
Symbol | |
ID | 6871203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4471639 |
End bp | 4474059 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787532 |
Product | glycerol-3-phosphate acyltransferase |
Protein accession | YP_002218130 |
Protein GI | 198245431 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.201291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCT GGCCACGAAT TTACTACAAA TTACTGAATT TACCATTAAG CATACTGGTA AAAAGCAAGT CTATTCCGGC GGAACCCGCC CAGGAATTGG GGCTCGATAC TTCTCGCCCC ATTATGTATG TCTTGCCATA CAACTCAAAA GCGGACTTAC TGACGCTGCG GGCGCAATGT CTGGCGCACG ATCTCCCGGA TCCGCTGGAG CCGCTGGAGA TCGACGGCGC GCTGTTGCCA CGCTATGTAT TTATTCACGG CGGACCGCGT GTCTTTACCT ATTACACGCC AAAAGAAGAG TCGGTGAAAC TTTTTCACGA TTATCTCGAT CTGCATCGGA GTAATCCGGC TTTGGACGTG CAGATGGTGC CCGTTTCCGT GATGTTTGGC CGCGCGCCGG GTCGTGAAAA GGGAGAAGAT AACCCGCCTT TACGTATGCT GAACGGCGTA CAGAAATTCT TTGCCATCTC CTGGCTGGGT CGCGATAGCT TTGTCCGATT CTCGCCGTCC GTCTCATTGC GTCGTATGGC TGATGAACAC GGCACCGATA AAATCATCGC GCAGAAGCTG GCTCGCGTGG CGCGTATGCA CTTTGCTCGC CAGCGCCTGG CGGCGGTTGG CCCACGCCTG CCCGCCCGTC AGGATCTGTT TAACAAACTG CTGGCCTCGA AAGCGATCGC CCGCGCGGTA GAAGACGAAG CGCGCAGTAA AAAAATCTCT CATGAAAAAG CGCAGCAAAA CGCCATTGCG CTGATGGAAG AGATCGCGGC GAACTTCTCT TACGAGATGA TTCGTTTGAC CGACAGGATT TTGGGGTTTA CCTGGAACCG TCTTTACCAG GGAATTAACG TGCATAACGC CGAGCGCGTA CGCCAACTGG CGCACGACGG GCATGAAATC GTCTATGTAC CCTGTCACCG CAGCCATATG GACTACTTGC TCCTTTCTTA TGTACTGTAC CATCAGGGAC TGGTTCCGCC GCATATTGCC GCCGGTATTA ACCTTAATTT CTGGCCCGCT GGCCCGATTT TCCGTCGTCT GGGCGCGTTC TTTATTCGTC GCACCTTTAA GGGGAATAAA CTCTATTCCA CCGTCTTTCG CGAATACCTG GGCGAACTGT TCAGCCGCGG TTACTCGGTT GAGTATTTTG TCGAAGGAGG ACGTTCGCGT ACCGGACGTT TGTTAGACCC GAAAACCGGC ACCCTGTCGA TGACTATCCA GGCGATGCTG CGCGGCGGTA CCCGTCCAAT TACGTTAGTG CCTATTTACA TCGGCTATGA GCACGTCATG GAAGTGGGCA CCTATGCGAA AGAACTGCGC GGCGCGACAA AAGAGAAAGA GAGCCTGCCG CAGATGCTGA AAGGCTTGAG CAAGCTGCGC AATCTGGGTC AGGGCTACGT TAACTTTGGC GAACCGATGC CGCTCATGAC GTACCTGAAC CAGCATGTGC CGGAGTGGCG CGAATCTATC GACCCTATAG AGGCCATACG CCCAGCCTGG CTGACGCCGA CGGTAAATAG TATCGCCGCC GATCTGATGG TGCGTATTAA CAACGCTGGC GCGGCAAACG CGATGAACCT GTGTTGTACC GCGCTGTTAG CGTCGCGTCA GCGCTCGCTC ACCCGCGAGC AGCTCACCGA GCAGCTTGAT TGCTATCTCG ATCTGATGCG CAATGTCCCT TATTCCACAG ACTCAACCGT TCCTGCCGCC AGCGCTGGCG AGCTCATCGC TCACGCGCTG CAGATGAATA AGTTTGAGGT CGAGAAAGAC ACCATTGGCG ATATCATCAT CCTGCCGCGC GAGCAGGCGG TGTTGATGAC CTATTATCGT AACAATATCG CGCATATGTT GATTATGCCT TCGCTGATGG CGGCGATTAT CACCCAGCAT CGTCGCATTT CGCGTGATGC GTTGCAGCAG CATGTTGAAG CGCTCTATCC GATGTTAAAA GCGGAGCTGT TCCTGCGCTG GGAGCGCGAG GAGTTAGCCT CGGTCATTGA CGCTCTGGCC AGTGAAATGC AGCGTCAGGG GCTAATTACC CTGCAGGATG ATGAACTGCA TATCAACCCG ACGCATTCCC GTACGCTGCA GCTGCTGGCG GCAGGCGCGC GCGAAACGCT ACAGCGTTAT GCCATTACGT TCTGGCTGTT GAGCGCCAAT CCGTCCATCA ACCGCAGTAC GCTGGAGAAA GAAAGCCGTA CCGTGGCGCA ACGTCTGTCT GTCCTGCACG GTATTAACGC GCCGGAGTTT TTCGACAAAG CGGTGTTCAG TTCACTCGTG TTGACGCTAC GGGATGAGGG TTATATCAGT GATACGGGCG ATGCCGAACC GGCAGAAACG ATGAAGATAT ATCAGATGCT TGCCGATCTG ATTACCTCTG ATGTCCGTCT GACGATTGAA AGCGCGACGC AGGGCGAGTA A
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Protein sequence | MSGWPRIYYK LLNLPLSILV KSKSIPAEPA QELGLDTSRP IMYVLPYNSK ADLLTLRAQC LAHDLPDPLE PLEIDGALLP RYVFIHGGPR VFTYYTPKEE SVKLFHDYLD LHRSNPALDV QMVPVSVMFG RAPGREKGED NPPLRMLNGV QKFFAISWLG RDSFVRFSPS VSLRRMADEH GTDKIIAQKL ARVARMHFAR QRLAAVGPRL PARQDLFNKL LASKAIARAV EDEARSKKIS HEKAQQNAIA LMEEIAANFS YEMIRLTDRI LGFTWNRLYQ GINVHNAERV RQLAHDGHEI VYVPCHRSHM DYLLLSYVLY HQGLVPPHIA AGINLNFWPA GPIFRRLGAF FIRRTFKGNK LYSTVFREYL GELFSRGYSV EYFVEGGRSR TGRLLDPKTG TLSMTIQAML RGGTRPITLV PIYIGYEHVM EVGTYAKELR GATKEKESLP QMLKGLSKLR NLGQGYVNFG EPMPLMTYLN QHVPEWRESI DPIEAIRPAW LTPTVNSIAA DLMVRINNAG AANAMNLCCT ALLASRQRSL TREQLTEQLD CYLDLMRNVP YSTDSTVPAA SAGELIAHAL QMNKFEVEKD TIGDIIILPR EQAVLMTYYR NNIAHMLIMP SLMAAIITQH RRISRDALQQ HVEALYPMLK AELFLRWERE ELASVIDALA SEMQRQGLIT LQDDELHINP THSRTLQLLA AGARETLQRY AITFWLLSAN PSINRSTLEK ESRTVAQRLS VLHGINAPEF FDKAVFSSLV LTLRDEGYIS DTGDAEPAET MKIYQMLADL ITSDVRLTIE SATQGE
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