Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4628 |
Symbol | ubiA |
ID | 6871717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4470668 |
End bp | 4471540 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787531 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_002218129 |
Protein GI | 198241986 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.133714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGGA GTCTGACGCA GAGTAAGCTG CTGGCGTTTC ACCGTTTGAT GCGTACAGAT AAGCCTATTG GCGCGTTGCT GCTGCTCTGG CCGACGCTTT GGGCGCTATG GGTGGCGACG CCGGGTATGC CTCAGCTGTG GATTTTGGCA GTTTTTGTCG CTGGCGTGTG GTTAATGCGC GCGGCGGGCT GCGTGGTGAA TGATTATGCC GATCGTAAAT TTGACGGACA TGTAAAACGT ACGGTCAACC GACCTTTACC CAGCGGCGCC GTGACAGAGA AAGAAGCGCG CAACCTGTTT GTGGTGCTGG TGCTGCTGGC GTTTCTGTTG GTGCTGACGC TGAACGCCAT GACGATTCTG CTTTCCGTGG CGGCGCTGGC GTTGGCCTGG GTTTATCCCT TTATGAAACG CTACACCCAC CTGCCGCAGG TCGTGCTGGG GGCCGCTTTC GGCTGGTCAA TCCCCATGGC GTTCGCCGCG GTGAGCGAAT CCCTGCCGTT GAGCTGCTGG CTAATGTTCC TCGCCAATAT TCTCTGGGCA GTGGCTTACG ATACGCAATA TGCGATGGTC GACAGAGATG ATGATATCAA GATAGGCATT AAATCGACGG CGATCCTGTT TGGTCGTTAT GACACATTGA TTATCGGGAT TCTGCAGCTT GGCGTCATGG CGTTAATGGC GCTGATCGGC TGGTTGAATG GTCTGGGATG GGGATATTAC TGGGCTGTGC TGGTGGCGGG CGCGCTGTTT GTCTACCAGC AAAAACTGAT TGCGAACCGT GAGCGTGAAG CCTGCTTTAA AGCCTTTATG AACAATAACT ACGTTGGCCT GGTGCTATTT TTAGGGCTGG CGATGAGTTA CTGGCACTTC TGA
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Protein sequence | MEWSLTQSKL LAFHRLMRTD KPIGALLLLW PTLWALWVAT PGMPQLWILA VFVAGVWLMR AAGCVVNDYA DRKFDGHVKR TVNRPLPSGA VTEKEARNLF VVLVLLAFLL VLTLNAMTIL LSVAALALAW VYPFMKRYTH LPQVVLGAAF GWSIPMAFAA VSESLPLSCW LMFLANILWA VAYDTQYAMV DRDDDIKIGI KSTAILFGRY DTLIIGILQL GVMALMALIG WLNGLGWGYY WAVLVAGALF VYQQKLIANR EREACFKAFM NNNYVGLVLF LGLAMSYWHF
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