Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4615 |
Symbol | pgi |
ID | 6873231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4455620 |
End bp | 4457269 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642787518 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_002218116 |
Protein GI | 198242122 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.267215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA TCAATCCAAC GCAGACTTCT GCCTGGCAGG CGCTCCAGAA ACACTACGAT GAAATGAAAG ACGTTACGAT CGCTGAGCTT TTCGCGAACG ATAGCGACCG TTTCGCTAAA TTTTCCGCGA CGTTTGACGA TCTGATGCTG GTGGATTTCT CCAAAAACCG CATCACCGAA GAGACGCTGG CAAAATTACA GGATCTGGCG AAAGAGACCG ATCTGGCCGG CGCGATTAAA TCCATGTTCT CCGGCGAGAA GATCAACCGC ACCGAAGACC GCGCCGTGCT GCACGTGGCG CTGCGTAACC GTAGCAATAC GCCGATCATT GTGGACGGCA AAGATGTGAT GCCGGAAGTG AACGCCGTGC TTGAGAAAAT GAAAACTTTC TCGCAAGCGA TTATCTCCGG TCAGTGGAAA GGCTACACCG GTAAGGCCAT CACCGACGTG GTGAACATCG GTATCGGCGG TTCCGACCTC GGCCCGTTCA TGGTGACCGA AGCGCTGCGT CCGTATAAAA ATCATCTGAC TATGCACTTC GTCTCTAACG TTGATGGCAC CCACATCGCT GAAGTGCTGA AAAAAGTGAA CCCGGAAACC ACGCTGTTCC TGGTCGCTTC TAAAACTTTC ACCACCCAGG AAACCATGAC CAACGCCCAC AGCGCGCGCG ACTGGTTCCT GAAAACTGCA GGCGATGAAA AACACGTGGC GAAACACTTT GCTGCGCTCT CCACCAACGC CAAAGCGGTC GGCGAATTTG GTATCGACAC GGCCAATATG TTCGAGTTCT GGGACTGGGT CGGCGGTCGT TACTCGCTGT GGTCTGCCAT CGGGCTGTCC ATTATTCTGT CCGTCGGTTT CGACAACTTT GTCGAGCTGC TTTCCGGCGC GCACGCGATG GACAAGCATT TCTCCACCAC TCCGGCGGAG AAAAACCTAC CCATTCTGCT GGCGTTGATT GGCATCTGGT ACAACAATTT CTTCGGCGCG GAAACCGAAG CCATTCTGCC GTACGACCAG TATATGCACC GTTTCGCCGC CTACTTCCAG CAGGGTAACA TGGAATCCAA CGGTAAATAC GTTGACCGTA ACGGCAACGC CGTGGATTAC CAGACAGGCC CAATTATCTG GGGCGAACCA GGCACCAACG GTCAGCACGC GTTTTATCAA TTGATTCACC AGGGTACTAA AATGGTGCCG TGTGACTTTA TCGCCCCGGC TATCACCCAT AACCCGCTAT CCGATCATCA TCAGAAGCTG CTGTCTAACT TCTTCGCGCA GACCGAAGCG CTGGCGTTTG GTAAATCCCG CGAGGTGGTT GAGCAGGAAT ATCGCGATCA GGGTAAAGAT CCGGCGCAGC TTGAACACGT TGTGCCATTC AAAGTGTTTG AAGGCAACCG CCCGACCAAC TCTATCCTGC TGCGTGAAAT TACGCCGTTC AGCCTGGGCG CACTGATTGC GTTGTATGAG CATAAAATCT TTACACAGGG CGTCATCCTG AACATCTTTA CTTTCGACCA GTGGGGCGTT GAGTTGGGTA AACAGTTGGC TAACCGTATT CTGCCGGAGT TGGGCGATGA TAAAGCTATT TCGTCCCATG ATAGCTCTAC TAACGGTCTG ATTAACCGTT ATAAAGCCTG GCGAGCCTGA
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Protein sequence | MKNINPTQTS AWQALQKHYD EMKDVTIAEL FANDSDRFAK FSATFDDLML VDFSKNRITE ETLAKLQDLA KETDLAGAIK SMFSGEKINR TEDRAVLHVA LRNRSNTPII VDGKDVMPEV NAVLEKMKTF SQAIISGQWK GYTGKAITDV VNIGIGGSDL GPFMVTEALR PYKNHLTMHF VSNVDGTHIA EVLKKVNPET TLFLVASKTF TTQETMTNAH SARDWFLKTA GDEKHVAKHF AALSTNAKAV GEFGIDTANM FEFWDWVGGR YSLWSAIGLS IILSVGFDNF VELLSGAHAM DKHFSTTPAE KNLPILLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKY VDRNGNAVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKMVP CDFIAPAITH NPLSDHHQKL LSNFFAQTEA LAFGKSREVV EQEYRDQGKD PAQLEHVVPF KVFEGNRPTN SILLREITPF SLGALIALYE HKIFTQGVIL NIFTFDQWGV ELGKQLANRI LPELGDDKAI SSHDSSTNGL INRYKAWRA
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