| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4595 |
|---|
| Symbol | aceK |
|---|
| ID | 6872559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4435126 |
|---|
| End bp | 4436877 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642787499 |
|---|
| Product | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
|---|
| Protein accession | YP_002218097 |
|---|
| Protein GI | 198245666 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4579] Isocitrate dehydrogenase kinase/phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.434751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTG GCCTGGAATT ACTGATTGCT CAAACCATCC TGCAAGGCTT TGACGCGCAG
TATGGTCGAT TTCTGGAAGT GACTTCCGGC GCGCAGCAGC GTTTTGAACA GGCCGACTGG
CACGCCGTCC AGCAGGCGAT GAAAAGCCGT ATCCACCTCT ATGATCATCA TGTGGGTCTG
GTGGTGGAGC AACTGCGCTG TATTACCGAT GGCAAAAGTA CCGACGCGGA TTTCCTTTTA
CGCGTTAAAG AGCATTACAC CCGGCTGTTG CCGGATTACC CGCGCTTCGA GATTGCGGAG
AGCTTTTTCA ACTCCGTTTA TTGCCGGTTA TTTGACCACC GCTCGTTAAC ACCCGAGCGG
TTGTTTATTT TCAGTTCGCA ACCGGAGCGT CGCTTCCGTA CTATCCCGCG CCCGCTGGCC
AAAGACTTCT TTCCCGATCA CGGTTGGGAG ACGCTGTTGA TGCGCATACT CAGTGATTTA
CCGCTGCGTC TGCCCTGGCA GAATAAAAGC CGGGATATCC GCTATATTAT CGCGCACCTG
ACTGAAACAC TGGGCGAGGA CGCGCTACCT TGTTGCCATG TCCAGGTGGC GAATGAGTTG
TTTTACCGTA ATAAAGCGGC CTGGCTGGTA GGTAAATTAA CCACACCTGA CGGTACGCTG
CCGTTTTTAT TGCCGATTCA TCGCACTGAT GAGGGGGAAC TGTTTGTCGA TACCTGCCTG
ACCACCACGG CAGAAGCGAG CATTGTGTTT GGTTTTGCCC GCTCTTATTT TATGGTGTAT
GCGCCGCTGC CTGCCGCGCT GGTTGAGTGG TTGCGTGAAA TCCTGCCGGG TAAAACCACT
GCCGAACTGT ATATGGCGAT TGGTTGCCAG AAACATGCGA AAACCGAAAG CTACCGCGAA
TATTTGTGTT ATCTGGCTGA AAGCGATGAG AAATTCATTG AGGCGCCTGG CATCCGCGGC
ATGGTGATGC TGGTGTTTAC CCTGCCAGGT TTCGACCGGG TATTTAAAAT CATTAAAGAC
AAATTCGCCC CGCAGAAAGA GATGTCCGCC GCCCATGTGC GTGCCTGTTA TCAACTGGTA
AAAGAGCATG ATCGCGTTGG TCGTATGGCG GATACCCAGG AGTTTGAGAA TTTCGTACTG
GATAAACGGC AAATTGATCC GGCGCTGATG GCGCTGTTAC GGCAAGAAGC GCCAGAGAAG
ATTACCGATC TTGGGGAACA TATCGTCATT CGCCATCTCT ATATTGAACG TCGCATGGTG
CCGCTCAATA TCTGGCTGGA ACAGGTAGAA GGTCAGCAGT TGCGCGATGC GATAGAAGAA
TATGGTAATG CGATTCGCCA GCTTGCCGCC GCTAATATTT TCCCCGGCGA TATGTTGTTT
AAAAACTTTG GCGTTACCCG TCATGGTCGC GTGGTGTTCT ACGACTACGA TGAAATTTGC
TACATGACGG AAGTGAATTT CCGCGATATT CCGCCAGCGC GTTATCCGGA AGACGAACTG
GCCAGCGAAC CCTGGTATAG CGTCTCGCCG GGTGATGTTT TCCCGGAGGA GTTTCGCCAC
TGGCTGTGTG CCGATCCGCG TATCGGACCA TTGTTTGAAG AGATGCATGC CGACCTGTTT
CGCGCCGATT ACTGGCGCGC GCTACAGACG CGTATTAAAG AAGGGCATGT AGAAGATGTG
TATGCCTATC GACGTAGACA GCGCTTTAGC GTGCGTTACG GCGCGATCTC GAGTACGGCG
AACTCTTCGT AA
|
|---|
| Protein sequence | MPRGLELLIA QTILQGFDAQ YGRFLEVTSG AQQRFEQADW HAVQQAMKSR IHLYDHHVGL
VVEQLRCITD GKSTDADFLL RVKEHYTRLL PDYPRFEIAE SFFNSVYCRL FDHRSLTPER
LFIFSSQPER RFRTIPRPLA KDFFPDHGWE TLLMRILSDL PLRLPWQNKS RDIRYIIAHL
TETLGEDALP CCHVQVANEL FYRNKAAWLV GKLTTPDGTL PFLLPIHRTD EGELFVDTCL
TTTAEASIVF GFARSYFMVY APLPAALVEW LREILPGKTT AELYMAIGCQ KHAKTESYRE
YLCYLAESDE KFIEAPGIRG MVMLVFTLPG FDRVFKIIKD KFAPQKEMSA AHVRACYQLV
KEHDRVGRMA DTQEFENFVL DKRQIDPALM ALLRQEAPEK ITDLGEHIVI RHLYIERRMV
PLNIWLEQVE GQQLRDAIEE YGNAIRQLAA ANIFPGDMLF KNFGVTRHGR VVFYDYDEIC
YMTEVNFRDI PPARYPEDEL ASEPWYSVSP GDVFPEEFRH WLCADPRIGP LFEEMHADLF
RADYWRALQT RIKEGHVEDV YAYRRRQRFS VRYGAISSTA NSS
|
|---|
| |