Gene SeD_A4573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4573 
SymbolnudC 
ID6874610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4413767 
End bp4414540 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content55% 
IMG OID642787480 
ProductNADH pyrophosphatase 
Protein accessionYP_002218082 
Protein GI198242203 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.117835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTA TAATTGAGAA ATTAGAGAGT GGCTGGTGGA TCGTCAGCCA TGAACAAAAA 
TTATGGTTGC CGTATGGGGA ATTACCACAC GGGCTGGCGG CAAATTTCGA TCTTGTGGGG
CAGCGCGCAC TCCGGATAGG TGAATGGCAA GGCGAGCCCG TCTGGCTGGT GTTACAGCAT
CGACGCCATG ATATGGGATC GGTTCGCCAG GTTATCGATC AGGATGCCGG GCTGTTTCAA
CTGGCGGGAC GTGGCGTACA GTTGGCGGAG TTTTATCGTT CGCATAAATT TTGCGGCTAT
TGCGGGCACC CTATGCACCC GAGTAAAACC GAATGGGCGA TGCTGTGCAG CCATTGCCGC
GAGCGTTACT ACCCGCAAAT CGCCCCTTGC ATTATCGTCG CGATCCGCCG TGAGGATTCG
ATCCTCCTTG CCCAGCACGT TCGCCACCGC AACGGCGTGC ATACCGTGCT GGCCGGGTTT
GTTGAAGTCG GCGAAACCTT AGAACAGGCG GTCGCGCGAG AGGTAATGGA GGAGAGCGGG
ATTAAGGTGA AAAATCTGCG CTATGTGACT TCCCAGCCGT GGCCTTTCCC GCAGTCGTTG
ATGACCGCTT TTATGGCGGA GTATGACAGC GGCGAGATTG TCATCGACCC GAAAGAACTG
TTGGAAGCAA ATTGGTACCG TTATGACGAT CTGCCGCTAC TACCGCCACC GGGCACCGTC
GCGCGCCGTT TGATCGAAGA TACGGTGGCA ATGTGTCGGG CTGAATATGA TTGA
 
Protein sequence
MDRIIEKLES GWWIVSHEQK LWLPYGELPH GLAANFDLVG QRALRIGEWQ GEPVWLVLQH 
RRHDMGSVRQ VIDQDAGLFQ LAGRGVQLAE FYRSHKFCGY CGHPMHPSKT EWAMLCSHCR
ERYYPQIAPC IIVAIRREDS ILLAQHVRHR NGVHTVLAGF VEVGETLEQA VAREVMEESG
IKVKNLRYVT SQPWPFPQSL MTAFMAEYDS GEIVIDPKEL LEANWYRYDD LPLLPPPGTV
ARRLIEDTVA MCRAEYD