| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4556 |
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| Symbol | rplA |
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| ID | 6871274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4394420 |
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| End bp | 4395124 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642787465 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002218067 |
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| Protein GI | 198246081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.103924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00000000000032652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC TGACCAAGCG TATGCGCGTG ATCCGTGAAA AAGTTGATGC GACCAAACAG
TACGACATCA ACGAAGCTAT TGCCCTGCTG AAAGAGCTGG CCACTGCTAA ATTCAACGAA
AGCGTTGACG TTGCCGTTAA CCTCGGCATC GACGCTCGTA AATCTGACCA GAACGTTCGT
GGCGCGACTG TACTGCCGCA CGGTACTGGC CGTTCTGTTC GCGTTGCCGT ATTTACCCAG
GGCCCGAACG CTGAAGCAGC TAAAGCTGCT GGCGCTGAGC TGGTAGGTAT GGAAGATCTG
GCTGACCAGA TCAAGAAAGG CGAAATGAAC TTCGACGTTG TTATCGCATC CCCGGATGCA
ATGCGCGTTG TTGGCCAGCT GGGCCAGGTT CTGGGTCCGC GCGGCCTGAT GCCAAACCCG
AAAGTCGGTA CCGTAACTCC GAACGTTGCT GAAGCGGTTA AGAACGCTAA AGCAGGTCAG
GTTCGTTACC GTAACGACAA AAACGGCATC ATCCACACCA CCATCGGTAA AGTGGACTTT
GACGCTGACA AACTGAAAGA AAACCTGGAA GCTCTGCTGG TTGCGCTGAA AAAAGCAAAA
CCGAGCCAGG CGAAAGGCGT GTACATCAAG AAAGTTAGCA TCTCCACCAC CATGGGTGCT
GGCGTTGCCG TTGATCAGGC TGGTCTGAGC GCATCTGCGA ACTAA
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| Protein sequence | MAKLTKRMRV IREKVDATKQ YDINEAIALL KELATAKFNE SVDVAVNLGI DARKSDQNVR
GATVLPHGTG RSVRVAVFTQ GPNAEAAKAA GAELVGMEDL ADQIKKGEMN FDVVIASPDA
MRVVGQLGQV LGPRGLMPNP KVGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
DADKLKENLE ALLVALKKAK PSQAKGVYIK KVSISTTMGA GVAVDQAGLS ASAN
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