Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4531 |
Symbol | sthA |
ID | 6875564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4375052 |
End bp | 4376464 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642787443 |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | YP_002218054 |
Protein GI | 198242526 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.455944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00000533814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGTAATA CCATGCCACA TTCCTGGGAT TATGATGCAG TCGTCATAGG GTCAGGCCCC GGCGGTGAAG GCGCTGCAAT GGGTCTGGTT AAGCAAGGAG CACGCGTCGC GGTGATTGAG CGTTATCATA ACGTTGGCGG CGGATGTACC CACTGGGGCA CCATCCCATC CAAAGCCCTT CGCCACGCCG TCAGCCGCAT TATTGAATTT AATCAAAACC CGCTCTATAG CGACCACTCC CGTCTCCTTC GTTCTTCTTT CGCCGACATC CTTAATCATG CCGATAACGT GATTAATCAA CAAACGCGTA TGCGTCAGGG GTTTTATGAG CGTAACCACT GTGAAATATT GCAGGGCAAC GCCCATTTTA TTGACGAACA TACCCTGGCG CTGGAATGCC ATGACGGCAC GGTTGAAACC CTGACGGCAG AAAAATTTGT TATTGCCTGT GGTTCGCGTC CTTACCATCC CAATGATGTG GATTTCTCGC ATCCGCGCAT TTATGACAGC GACTCAATCC TGAGTCTCCA CCATGAACCG CGCCACGTTA TTATTTACGG CGCCGGCGTT ATCGGCTGCG AATATGCGTC CATCTTCCGC GGTATGGATG TGAAAGTGGA TCTGATCAAC ACCCGCGATC GCCTGCTGGC CTTTCTCGAT CAGGAGATGT CCGACTCTCT CTCTTACCAT TTCTGGAATA GCGGCGTGGT TATTCGCCAC AATGAAGAGT ATGAGAAAAT CGAAGGCTGC GATGATGGCG TCATCATGCA CCTGAAATCC GGCAAAAAAC TGAAGGCTGA CTGCCTGCTC TATGCTAATG GCCGTACCGG TAACACCGAT TCGCTGGCGC TGGAGAATAT TGGTTTGGAA ACAGACAGCC GTGGACAGCT CAAAGTCAAC AGTATGTACC AGACCGCCCT GCCGCACGTC TATGCGGTGG GCGACGTGAT TGGCTATCCC AGTCTGGCCT CCGCCGCCTA CGATCAGGGG CGTATTGCAG CGCAGGCGCT GGTGAAAGGC GAAGCGAGCG CGCATCTCAT CGAAGATATC CCCACCGGGA TTTATACCAT TCCGGAAATC AGTTCTGTCG GCAAAACCGA GCAGCAGTTA ACGGCAATGA AAGTGCCTTA CGAAGTGGGC CGCGCGCAAT TTAAGCATCT GGCGCGAGCG CAAATCGTCG GCATGAACGT CGGCACGCTA AAAATTCTCT TCCACCGCGA AACCAAAGAA ATTCTGGGGA TTCACTGCTT TGGCGAACGC GCCGCCGAAA TTATTCATAT CGGCCAGGCG ATCATGGAGC AGAAAGGTGG CGGTAACACC ATCGAATACT TCGTTAACAC CACCTTTAAC TACCCAACCA TGGCGGAAGC TTATCGGGTT GCGGCGTTGA ACGGCTTAAA CCGCCTGTTT TAA
|
Protein sequence | MSNTMPHSWD YDAVVIGSGP GGEGAAMGLV KQGARVAVIE RYHNVGGGCT HWGTIPSKAL RHAVSRIIEF NQNPLYSDHS RLLRSSFADI LNHADNVINQ QTRMRQGFYE RNHCEILQGN AHFIDEHTLA LECHDGTVET LTAEKFVIAC GSRPYHPNDV DFSHPRIYDS DSILSLHHEP RHVIIYGAGV IGCEYASIFR GMDVKVDLIN TRDRLLAFLD QEMSDSLSYH FWNSGVVIRH NEEYEKIEGC DDGVIMHLKS GKKLKADCLL YANGRTGNTD SLALENIGLE TDSRGQLKVN SMYQTALPHV YAVGDVIGYP SLASAAYDQG RIAAQALVKG EASAHLIEDI PTGIYTIPEI SSVGKTEQQL TAMKVPYEVG RAQFKHLARA QIVGMNVGTL KILFHRETKE ILGIHCFGER AAEIIHIGQA IMEQKGGGNT IEYFVNTTFN YPTMAEAYRV AALNGLNRLF
|
| |