Gene SeD_A4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4516 
Symbol 
ID6873134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4355564 
End bp4358053 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content58% 
IMG OID642787429 
Productmultiphosphoryl transfer protein 2 
Protein accessionYP_002218040 
Protein GI198244415 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000995524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAATTTA CCTGTGAACT GCCGAATGGC GTACATGCGC GCCCGGCAAG CCACGTAGAA 
ACGCTGTGTA ATACCTTCAC GTCGCAAATT GAGTGGCACA ACCTGCGCAC CGATCGCAAA
GGCAGCGCCA AAAGCGCGCT GGCGCTGATT GGCACCGACA CGCTGGCTGG CGACCACTGT
CAGCTGGTGA TTTCCGGTGC CGATGAACAG GTTGCCTGTC AGCGTCTGAG TCAATGGCTG
CGCGATGAAT TCCCACTCTG CGACGCGCCG CTGGCGGAGA TTAAAAACAG CGAACTGGAG
CCGCTTCCGG CGTCGTTGAC CCAGCTGAAT CCGCAGATTT ACCGCGCCCG TAGCGTGTGT
AGCGGCAGCG CGGGCGGCGT ACTGACGCCA CTCTCTTCCC TGGATCTCAA TGCGCTCGGC
GAACTCCCGA CCGCCAACGA CACAGAGACG GAACAAGCCG CGCTGGACAA TGGCTTAGCG
ATGTTGATAA AGCATATTGA GTTTCGTCAG CTCGACAGTG ACGGTGCCGC CAGCGCGATT
CTGGAAGCCC ATCGTTCGCT GGCAGGCGAC GCTTCACTGC GTCAGCATTT ACTGGACGGC
GTTCTGCGCG GTTTAAGCTG CGCGCAGGCA ATCGTGGAAA GCGCGAACCA TTTCTGCAAT
GAGTTCGCTC GCGCCAGCAG CAGCTATTTA CAGGAACGCG CGCTGGATGT TCGTGACGTT
TGCTTCCAGT TACTGCAACA CATTTACGGT GAGCAGCGCT TTCCGGCGCC GGGCCAGTTG
ACCCGGCCAT CTATCTGTAT GGCGGAAGAG TTGACGCCAA GCCAGTTCCT CGAACTGGAT
AAAACCTTTC TCAAAGGTCT GCTGTTAAAA AGCGGCGGCA CCACTTCGCA CACGGTGATT
CTCGCCCGCT CATTCAACAT TCCCACCCTG GTTGGCGTGG AGATTGAGGC CTTAACACCG
TGGCGTCAGC AGACGGTTTA TATTGACGGC AACGCAGGCG CGATTGTCGT TGCGCCTGAC
GAGCCTGTCA CTCGTTACTA TCAGCAGGAA GCCCGCGTGC AAGACGCCCT GCGCGAACAG
CAGCGCATCT GGCTGACCCA GGAAGCGCGC ACCGCTGACG GCATCCGCAT GGAGGTCGCC
GCCAACATCG CGCACTCCGT CGAGGCGCAA GCGGCCTTTA GTAACGGCGC GGAAGCGGTT
GGCCTGTTCC GCACAGAAAT GCTGTATATG GACCGCGCCT GCGCGCCGGA CGAAAACGAG
CTGTACAATA TTTTTTGCCA GGCGCTGGAG TCCGCAAAGG GACGCAGCAT TATTGTGCGC
ACAATGGATA TAGGCGGCGA TAAGCCCGTT GATTATCTGA ATATTCCTGC CGAAGCCAAC
CCATTCCTCG GCTATCGCGC CGTCCGTATT TATGAAGAGT ACGCTTCTCT GTTTACCACC
CAGCTACGCT CGATCCTCCG CGCGTCCGCC CACGGCAACC TGAAAATCAT GATCCCGATG
ATCTCCTCTA TGGAAGAGAT TCTGTGGGTC AAAGAGAAGC TGGCGGAAGC CAAACAGCAG
CTGCGTAATG AACATATCCC GTTCGATGAG AAGATCCCAC TCGGCATTAT GCTGGAAGTG
CCGTCGGTGA TGTTCATCAT CGATCAATGC TGTGAAGAGA TTGATTTCTT TAGTATTGGT
AGTAACGATC TAACACAATA CCTGCTGGCG GTAGACCGTG ATAACGCCAA AGTCACTCGT
CACTACAACA GCCTGAATCC CGCCTTCCTG CGCGCGTTGG ATTTCGCGGT GCAGGCGGTA
CATCGTCAGG GCAAATGGAT TGGTCTGTGC GGCGAACTGG GGGCCAAAGG TTCGGTTCTG
CCATTGCTGG TAGGTCTGGG GCTGGACGAG ATCAGCATGG GCGCGCCGTC GATTCCCGCC
GCCAAAGCGC GGATGGCACA ACTCGACAGC CGAGCCTGCC GCCAGTTGTT GAATCAGGCG
ATGGCCTGCC GCACCTCGCT GGAGGTGGAG CATCTGCTGG CGCAGTTCCG CATGTCGCAG
CAGGATGCCC CGCTGGTTAC CGCCCAATGC ATAACGCTTG ATAGCGACTG GCGCAGCAAA
GAGGAGGTGA TTAAAGGCAT GACCGACAAT CTGCTGCTGG CGGGCCGCTG CCGCTACCCG
CGCAAACTGG AAGCCGATCT ATGGGCGCGC GAGGCGGTAT TCTCCACCGG ACTGGGCTTT
AGCTTTGCCA TTCCGCACAG CAAATCGGAA CATATCGAAC AGTCCACCAT CAGCGTGGCG
CGCCTGAACG CGCCGGTACG CTGGGGAGAT GACGAGGCGC AGTTCATCAT TATGCTGACG
CTTAACAAAC ACGCCGCGGG CGACCAGCAT ATGCGTATTT TCTCGCGCCT GGCCCGCCGC
ATCATGCACG AAGAATTCCG CAACACGCTG GTTAACGCCG CTTCCGCCGA CGCTATCGCC
AGCCTGCTGC AACATGAACT TGAACTGTAA
 
Protein sequence
MEFTCELPNG VHARPASHVE TLCNTFTSQI EWHNLRTDRK GSAKSALALI GTDTLAGDHC 
QLVISGADEQ VACQRLSQWL RDEFPLCDAP LAEIKNSELE PLPASLTQLN PQIYRARSVC
SGSAGGVLTP LSSLDLNALG ELPTANDTET EQAALDNGLA MLIKHIEFRQ LDSDGAASAI
LEAHRSLAGD ASLRQHLLDG VLRGLSCAQA IVESANHFCN EFARASSSYL QERALDVRDV
CFQLLQHIYG EQRFPAPGQL TRPSICMAEE LTPSQFLELD KTFLKGLLLK SGGTTSHTVI
LARSFNIPTL VGVEIEALTP WRQQTVYIDG NAGAIVVAPD EPVTRYYQQE ARVQDALREQ
QRIWLTQEAR TADGIRMEVA ANIAHSVEAQ AAFSNGAEAV GLFRTEMLYM DRACAPDENE
LYNIFCQALE SAKGRSIIVR TMDIGGDKPV DYLNIPAEAN PFLGYRAVRI YEEYASLFTT
QLRSILRASA HGNLKIMIPM ISSMEEILWV KEKLAEAKQQ LRNEHIPFDE KIPLGIMLEV
PSVMFIIDQC CEEIDFFSIG SNDLTQYLLA VDRDNAKVTR HYNSLNPAFL RALDFAVQAV
HRQGKWIGLC GELGAKGSVL PLLVGLGLDE ISMGAPSIPA AKARMAQLDS RACRQLLNQA
MACRTSLEVE HLLAQFRMSQ QDAPLVTAQC ITLDSDWRSK EEVIKGMTDN LLLAGRCRYP
RKLEADLWAR EAVFSTGLGF SFAIPHSKSE HIEQSTISVA RLNAPVRWGD DEAQFIIMLT
LNKHAAGDQH MRIFSRLARR IMHEEFRNTL VNAASADAIA SLLQHELEL