Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4443 |
Symbol | |
ID | 6874661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4286017 |
End bp | 4286853 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787361 |
Product | transcriptional activator RhaS |
Protein accession | YP_002217972 |
Protein GI | 198244592 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAC TGCATAGCGT GGATTTTTTT CCATCAGGTA AAGCGCCCGT GGCGATTGAA CCTCGTCTGC CGCAAGCCGC TTTCCCTGAA CATCATCATG ATTTTCATGA AATCGTGATT GTGGAACACT GTACGGGCAT TCATGTATTC AACGGGCAGC CGTATACCAT CAGCGGCGGT ACCGTGTGTT TTGTTCGCGA TCACGACCGG CATTTATATG AACATACCGA CAACTTATGC CTGACGAATG TACTGTGGCG TTCACCGGAC GCCTTTCAGT TCCTGGCGGG GCTGGAGCAA TTACTGCCGC AGGAGCAGGA TGGTTACTAC CCTTCGCACT GGCGGGTGAA TCAGAGCGCG TTGCAGCAGG TGCGCCAGTT GGTCGGTCTG ATGGAGCGCG CCGGAGACGG CATGGATGCG CCTGCCGTGG CGAATCGCGA AATTTTGTTT ATGCAACTAC TGGTGTTGTT ACGCCGCAGT AGCCTGATGG AAGGCGCGAC CAATAACGAC GCCAAACTCA ACCAACTGAT GGCATGGCTG GAAGACCATT TTGCGGAGGA GGTCTGCTGG GAGGCGGTAG CTGAACAGTT TTCGCTGTCG CTACGCACGC TGCATCGTCA GCTTAAACAG CATACCGGGC TGACGCCGCA ACGTTACCTT AATCGCCTGC GTTTGATCAA AGCCCGGCAT TTATTGCGCC ATAGCGATCA TAGCGTGACA GAAATCGCGT ACCGCTGCGG TTTTGGCGAC AGTAACCACT TTTCGACTCT GTTTCGCCGA GAATTTAACT GGTCGCCGCG GGATATCCGT CAGGGACGCG ATGCGATAAT CCAGTAA
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Protein sequence | MTVLHSVDFF PSGKAPVAIE PRLPQAAFPE HHHDFHEIVI VEHCTGIHVF NGQPYTISGG TVCFVRDHDR HLYEHTDNLC LTNVLWRSPD AFQFLAGLEQ LLPQEQDGYY PSHWRVNQSA LQQVRQLVGL MERAGDGMDA PAVANREILF MQLLVLLRRS SLMEGATNND AKLNQLMAWL EDHFAEEVCW EAVAEQFSLS LRTLHRQLKQ HTGLTPQRYL NRLRLIKARH LLRHSDHSVT EIAYRCGFGD SNHFSTLFRR EFNWSPRDIR QGRDAIIQ
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