Gene SeD_A4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4417 
Symboldtd 
ID6874564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4265161 
End bp4265598 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content56% 
IMG OID642787337 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_002217948 
Protein GI198245624 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.722286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAT TAATTCAACG CGTAACCCGT GCCAGCGTCA CCGTGGAGGA CGAGGTGACG 
GGTGAAATCG GCCCAGGACT TTTGGTGTTA TTGGGTGTCG AAAAAGAAGA TGACGAACAA
AAAGCGAATC GTCTGTGCGA ACGCGTGCTG GGATACCGTA TCTTCAGCGA TGCTGACGGC
AAGATGAATC TGAATGTACA ACAGGCTGGC GGCAGCGTGC TGGTGGTGTC GCAGTTTACG
CTGGCGGCAG ATACCGAGCG CGGTATGCGA CCAAGCTTTT CCGGCGGGGC TGCGCCGGAT
CGCGCGCAGG CGCTTTATGA ATATTTTGTC GAACGCTGCC GCCAGCAGGC GATAAACACG
CAAACCGGAC GCTTCGCTGC CGATATGCAG GTTGAGCTGG TTAATGACGG TCCCGTGACA
TTCTGGCTCC AGGTATGA
 
Protein sequence
MIALIQRVTR ASVTVEDEVT GEIGPGLLVL LGVEKEDDEQ KANRLCERVL GYRIFSDADG 
KMNLNVQQAG GSVLVVSQFT LAADTERGMR PSFSGGAAPD RAQALYEYFV ERCRQQAINT
QTGRFAADMQ VELVNDGPVT FWLQV