Gene SeD_A4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4278 
Symbol 
ID6875640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4125119 
End bp4126117 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID642787208 
Producttranscriptional repressor RbsR 
Protein accessionYP_002217834 
Protein GI198243501 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.134192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.933942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACTA TGAAAGATGT TGCCCGCCTG GCGGGAGTCT CTACATCGAC GGTCTCTCAC 
GTTATTAACA AAGATCGCTT TGTGAGTGAG ACGATTACTG AAAAAGTTGA AGCGGCGATT 
AAATCACTTA ACTATGCGCC TTCCGCGCTG GCGCGAAGCC TCAAGTTAAA CCAGACCCGC 
ACGATTGGTA TGCTAATTAC CGCCAGTACC AACCCTTTTT ATTCCGAACT GGTGCGCGGC 
GTTGAGCGAA GCTGTTTTGA GCGCGGTTAT AGTCTGGTGC TGTGCAATAC CGAAGGCGAC 
GAGCAACGGA TGAACCGCAA CCTGGAGACG CTGATGCAAA AACGGGTAGA CGGTTTACTG 
CTGCTGTGTA CCGAAACGCA TCAGCCTTCT CGTGAAATCA TGGAGCGTTA TCCGTCTATT 
CCTACCGTCA TGATGGACTG GTCGCCGTTT GATGGTGAGG GCGATAGCGA TCTCATTCAG 
GATAATTCGT TGTTAGGCGG TGATCTTGCC ACCCAACACC TTATCGATAA AGGATTTACC 
CGAATAGCCT GTATTACCGG CCCGCTGGAC AAAACGCCAG CGCGTTTGCG GCTGGAAGGG 
TATCGGGCGG CGATGAAACG CGCAGGGCTG GCTATTCCGC AAGGCTATGA GATCACCGGC 
GATTTTGAAT TTGGCGGCGG CTTTGACGCC ATGCAGGCGT TACTCGCCCA TCAACAGCGA 
CCGCAAGCGG TTTTTACCGG AAACGATGCG ATGGCTGTCG GCGCCTATCA GGCGCTATAT 
CAGGCGGGGC TTCGTATCCC GCAGGATATG GCAGTCATTG GCTATGATGA TATTGAGCTG 
GCGCGCTATA TGACGCCGCC GCTGACGACT ATCCATCAGC CGAAAGATGA ATTGGGCGAG 
CTGGCTATTG ATGTGTTGAT TCATCGGATG GCGCAGCCCG CCTTGCAACA ACAGCGACTT 
CAGCTTACTC CGGTTTTGAC GGTGCGTGGG TCGGTTTAG
 
Protein sequence
MATMKDVARL AGVSTSTVSH VINKDRFVSE TITEKVEAAI KSLNYAPSAL ARSLKLNQTR 
TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL 
LLCTETHQPS REIMERYPSI PTVMMDWSPF DGEGDSDLIQ DNSLLGGDLA TQHLIDKGFT 
RIACITGPLD KTPARLRLEG YRAAMKRAGL AIPQGYEITG DFEFGGGFDA MQALLAHQQR 
PQAVFTGNDA MAVGAYQALY QAGLRIPQDM AVIGYDDIEL ARYMTPPLTT IHQPKDELGE 
LAIDVLIHRM AQPALQQQRL QLTPVLTVRG SV