Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4240 |
Symbol | |
ID | 6872079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4087800 |
End bp | 4088465 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787172 |
Product | 6-phosphogluconate phosphatase |
Protein accession | YP_002217798 |
Protein GI | 198242471 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0636361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAA TCGAAGCGGT GTTTTTTGAC TGTGACGGCA CGCTGGTCGA CAGTGAAGTA ATTTGCTCGC GCGCCTATGT CACTATGTTC CGGCAGTTCG GCATTACGCT TGAGCTCACG GAAGTATTCA GACGCTTTAA AGGCGTAAAG CTCTACGAAA TTATCGATAC CATCAGTAAA GAGCATGGCG TTGCGCTGGC AAAGGCGGAG CTGGAGCCGG TGTACCGCGC GGAAGTGGCG CGCCTGTTCG ATACCGAACT GGAAGCGATC GCGGGCGCAA ATACCCTGCT GGAGAGCATT AAGACGCCCA TGTGCGTGGT ATCCAACGGA CCGGTCAGTA AGATGCAGCA TTCGCTGGGT AAACTGGGCA TGTTGCATTA TTTTCCCGAT TTGCTGTTTA GCGGTTACGA TATTCAACGC TGGAAGCCCG ATCCGGCGCT GATGCTCCAC GCGGCGAACG CCATGAAGGT CAATGTTGAG AAGTGTATTC TGGTGGATGA TTCCAGCGCA GGCGCGCAGT CAGGAATTGC GGCGGGAATG GAAGTGTTTT ATTTCTGCGC CGATCCGCAT AACAAGCCGA TCGATCACCC TAACGTGACG ACTTTTACCG ATTTGGCGCA GTTGCCGGGA TTGTGGAAAG CGCGCGGGTG GGAGATTACG CGTTAA
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Protein sequence | MSQIEAVFFD CDGTLVDSEV ICSRAYVTMF RQFGITLELT EVFRRFKGVK LYEIIDTISK EHGVALAKAE LEPVYRAEVA RLFDTELEAI AGANTLLESI KTPMCVVSNG PVSKMQHSLG KLGMLHYFPD LLFSGYDIQR WKPDPALMLH AANAMKVNVE KCILVDDSSA GAQSGIAAGM EVFYFCADPH NKPIDHPNVT TFTDLAQLPG LWKARGWEIT R
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