Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4177 |
Symbol | uhpC |
ID | 6873783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4020741 |
End bp | 4022069 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642787110 |
Product | regulatory protein UhpC |
Protein accession | YP_002217736 |
Protein GI | 198244096 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCGT TTTTAAAAGC CCCGGCCAAC GCGCCGCTCA TCACCGATAA GCACGAGGTT GACGCCCGCT ATCGCTACTG GCGGCGGCAT ATCCTGATCA CCATTTGGTT GGGTTACGCG CTGTTCTATT TCACCCGTAA AAGCTTTAAC GCCGCCGCGC CGGAAATCCT TGCCAGCGGC ATTCTGACCC GCAGCGATAT CGGCCTGCTG GCGACGCTGT TTTACATCAC CTACGGGGTG TCGAAATTTG TCTCCGGCAT CGTTAGCGAT CGCTCTAACG CTCGCTATTT TATGGGCATC GGGCTGATTG CGACCGGCGT AGTGAATATT CTGTTCGGCT TCTCGACCTC GCTGTGGGCC TTTGCTCTGC TATGGGCGCT GAACGCCTTT TTCCAGGGGT TTGGATCGCC GGTTTGCGCC CGTTTGCTGA CCGCCTGGTA CTCGCGTACC GAGCGCGGCG GCTGGTGGGC GTTATGGAAC ACCGCGCACA ATGTCGGCGG GGCGCTGATC CCTCTCGTTA TGGCCGCTGT CGCCCTGCAT TATGGCTGGC GCGTCGGGAT GATGGTGGCC GGATTGCTTG CCATCGGGGT GGGCATGGTC CTCTGCTGGC GGCTGCGCGA CCGTCCGCAG GCGATTGGTT TACCGCCGGT AGGGGACTGG CGGCACGATG CGCTGGAGGT CGCCCAACAG CAAGAGGGCG CGGGGCTAAG TCGCAAAGAA ATCCTCGCTA AATATGTGCT GTTGAATCCC TATATCTGGC TGCTTTCGCT ATGTTATGTC TTAGTGTACG TGGTGCGCGC GGCGATCAAC GACTGGGGCA ACCTGTATAT GTCCGAGACG CTGGGCGTAG ATTTGGTCAC GGCCAACACG GCAGTATCGA TGTTTGAGCT GGGTGGATTT ATCGGCGCGC TGGTGGCGGG CTGGGGCTCG GACAAACTCT TCAACGGCAA CCGCGGACCG ATGAATTTAA TCTTCGCCGC CGGGATTTTG CTCTCTGTGG GTTCGCTGTG GCTGATGCCG TTCGCCAGCT ACGTGATGCA GGCGGCCTGT TTCTTCACCA CCGGTTTCTT TGTCTTCGGC CCGCAGATGC TCATTGGCAT GGCGGCGGCG GAGTGCTCGC ATAAAGAGGC GGCGGGCGCG GCCACCGGCT TTGTCGGCCT GTTCGCCTAT CTCGGCGCGT CGCTTTCCGG CTGGCCGTTA GCGAAAGTAC TGGAGATCTG GCACTGGACC GGTTTTTTTG CGGTCATCGC CATCGCGGCG GGGATCTCTG CGCTATTGCT GCTGCCATTT CTGAACGCTC AGGCCCCGCG CGAGACCAGC GAAGCGTGA
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Protein sequence | MLSFLKAPAN APLITDKHEV DARYRYWRRH ILITIWLGYA LFYFTRKSFN AAAPEILASG ILTRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGVVNI LFGFSTSLWA FALLWALNAF FQGFGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PLVMAAVALH YGWRVGMMVA GLLAIGVGMV LCWRLRDRPQ AIGLPPVGDW RHDALEVAQQ QEGAGLSRKE ILAKYVLLNP YIWLLSLCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVSMFELGGF IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQAAC FFTTGFFVFG PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLSGWPL AKVLEIWHWT GFFAVIAIAA GISALLLLPF LNAQAPRETS EA
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