Gene SeD_A4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4122 
Symbol 
ID6871508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3967222 
End bp3968085 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content53% 
IMG OID642787068 
Producthypothetical protein 
Protein accessionYP_002217695 
Protein GI198245721 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.970694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA GTATGACCGC CTACGCCCGG CGTGAAATCA AGGGTGAATG GGGTAGCGCG 
ACCTGGGAAA TGCGCTCGGT AAACCAGCGT TATCTGGAAA CTTACTTTCG TCTGCCGGAA
CAGTTCCGTA GTCTTGAACC CGTCGTGCGC GAACGCATTC GTACACGCCT GACGCGCGGC
AAAGTCGAAT GTATGCTGCG TTTTGAACCC GATGCCAGCG CGCAAGGCGA GCTTATTCTG
AATGAAAAGC TCGCGAAACA ATTAGTTAGC GCCGCAAACT GGGTCAAAAT GCAGAGCGAC
GAAGGGGAAA TCAATCCGGT TGATATTTTG CGCTGGCCAG GTGTCATGGC GGCGCAAGAG
CAGGATCTGG ACGCGATTGC CGCAGAAATT TTAGCCGCAC TGGACGGTAC GCTGGATGAC
TTTATCGTCG CGCGCGAAAC GGAAGGCCAG GCGCTGAAAG CGCTGATTGA ACAACGGCTG
GAAGGCGTCA GCGCCGAAGT AGCGAAAGTC CGCGCGCATA TGCCGGAAAT CCTGCAATGG
CAGCGTGAGC GCCTGGTCGC GAAGCTGGAA GATGCTCAGG TTCAGTTGGA AAACAACCGT
CTGGAGCAAG AGCTGGTGAT GATGGCGCAA CGCATTGATG TGGCGGAAGA GCTGGATCGT
CTGGAAGCGC ACATCAAAGA GACTTACAAC ATTCTGAAGA AAAAAGAGGC GGTAGGTCGC
CGTCTGGACT TCATGATGCA AGAATTTAAC CGTGAGTCGA ACACCCTGGC CTCCAAATCC
ATCAACGCTG ATGTAACTAA CTCCGCTATT GAATTAAAAG TGTTGATCGA GCAAATGCGC
GAGCAAATCC AGAATATTGA ATAA
 
Protein sequence
MIRSMTAYAR REIKGEWGSA TWEMRSVNQR YLETYFRLPE QFRSLEPVVR ERIRTRLTRG 
KVECMLRFEP DASAQGELIL NEKLAKQLVS AANWVKMQSD EGEINPVDIL RWPGVMAAQE
QDLDAIAAEI LAALDGTLDD FIVARETEGQ ALKALIEQRL EGVSAEVAKV RAHMPEILQW
QRERLVAKLE DAQVQLENNR LEQELVMMAQ RIDVAEELDR LEAHIKETYN ILKKKEAVGR
RLDFMMQEFN RESNTLASKS INADVTNSAI ELKVLIEQMR EQIQNIE