Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4100 |
Symbol | |
ID | 6875069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3949261 |
End bp | 3950406 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642787049 |
Product | lipopolysaccharide 1,2-N-acetylglucosaminetransferase |
Protein accession | YP_002217676 |
Protein GI | 198244660 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.564193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AAATCATATT TACTGTTACT CCTATATTTT CAATTCCTCC ACGTGGCGCG GCTGCGGTAG AAACCTGGAT TTACCAGGTT GCAAAACGAC TATCAATACC GAATGCTATT GCTTGTATAA AGAATGCTGG CTATCCTGAA TATAATAAAA TAAACGATAA CTGTGATATT CATTACATCG GGTTTAGTAA AGTTTATAAG CGTCTTTTTC AGAAATGGAC TCGTCTCGAC CCACTACCCT ATTCCCAGCG CGTCCTTAAT ATTAGAGATA AAGTGACTAC CCAGGAAGAT AGCGTCATTG TTATTCATAA TAGTATGAAA CTGTATCGGC AGATCAGAGA GCGCAATCCG AATGCAAAAC TGGTTATGCA CATGCATAAC GCATTTGAAC CAGAACTTCC TGATAAGGAT GCAAAAATTA TCGTGCCCAG TCAGTTTCTT AAAGCGTTTT ATGAAGAAAG ATTGCCCGCC GCTGCTGTTA GTATTGTGCC TAATGGTTTT TGTGCTGAGA CTTATAAAAG AAACCCACAA AATAACCTCC GTCAGCAATT AAATATTGCG GAAGATGCCA CCGTTCTCTT ATATGCCGGG AGAATTTCGC CTGATAAAGG CATCCTGTTG CTTTTGCAGG CGTTCAAAAA ATTACGTACC TTAAGAAGTA ATATTAAACT TGTCGTTGTT GGCGATCCTT ATGCAAGCCG CAAGGGTGAA AAAGCAGAGT ATCAAAAGAA AGTACTGGAC GCCGCAAAAG AGATTGGAAC TGATTGTATT ATGGCTGGGG GGCAATCTCC TGACCAGATG CATAACTTCT ATCATATAGC CGATCTGGTT ATTGTGCCAT CTCAGGTTGA AGAAGCATTT TGCATGGTGG CTGTAGAAGC GATGGCAGCA GGAAAAGCGG TTCTTGCCAG CAAAAAAGGG GGGATTAGCG AATTTGTGTT AGATGGCATA ACGGGCTATC ACCTCGCAGA ACCTATGTCG AGCGACAGTA TAATTAATGA TATTAACCGT GCGCTTGCTG ATAAGGAACG CCACCAGATT GCCGAAAAAG CAAAATCCCT GGTGTTTTCA AAATACAGTT GGGAAAATGT AGCTCAGCGT TTCGAGGAAC AGATGAAAAG CTGGTTTGAT AAGTGA
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Protein sequence | MIKKIIFTVT PIFSIPPRGA AAVETWIYQV AKRLSIPNAI ACIKNAGYPE YNKINDNCDI HYIGFSKVYK RLFQKWTRLD PLPYSQRVLN IRDKVTTQED SVIVIHNSMK LYRQIRERNP NAKLVMHMHN AFEPELPDKD AKIIVPSQFL KAFYEERLPA AAVSIVPNGF CAETYKRNPQ NNLRQQLNIA EDATVLLYAG RISPDKGILL LLQAFKKLRT LRSNIKLVVV GDPYASRKGE KAEYQKKVLD AAKEIGTDCI MAGGQSPDQM HNFYHIADLV IVPSQVEEAF CMVAVEAMAA GKAVLASKKG GISEFVLDGI TGYHLAEPMS SDSIINDINR ALADKERHQI AEKAKSLVFS KYSWENVAQR FEEQMKSWFD K
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