Gene SeD_A4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4082 
Symbol 
ID6873016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3930031 
End bp3931086 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content55% 
IMG OID642787031 
ProductLacI family transcriptional regulator 
Protein accessionYP_002217658 
Protein GI198244852 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA ATGCGCGGAT AAATCAGCCA ATCTTTGCAG GGGCATCAGA CGTGAAGAGA 
ACCAAATCAC CTCGTGCGCC GACGCTGGAA GATGTAGCAC GTAGCGCCGG GCTGTCTCCG 
ATGACAGTCA GCCGGGCATT GAATTCGCCA CAACTGGTTC GCCCCAAAAC GGTTGAGAAA 
GTCATGCAGG CGGTTCGCGT CACAGGCTAC ATACCCAACG CGTTAGCCGG TGGTCTGGCG 
TCGCGACGGA GTAAATTAAT CGCTGTCGTC GTGCCGCAAA TTAACAACAA CATGTTTGTC 
GATACCATCC AGTCGCTGAG CGATGAACTG GCCCGACGCG GATATCACAT ATTGCTGTGC 
GTGGCGGGAT ATACCGAACA AACGGAAGCG GAGTTGGTGG CGACACTGCT TTCCCGCCGC 
CCCGATGGCG TGGTGCTTAC CGGGATCCAT CACACGATAG AACTGAAAAA GGTCATCCTG 
AACGCGGCTA TTCCGGTGGT GGAAATTTGG GACTTAACGC CCACGCCGCT TGATATGCTG 
GTCGGTTTTT CCCATGAAAA AGTCGGGCAG GCGACGGGGG AGTATCTTTT GAGTAAGGGC 
TATCGTCGTC CCGGCTTGTT GTGGACCGCC GATCGCCGAG CCGCGCAACG TAAGCAGGGG 
TTATGTAGTG TTCTTCAACG CCACGCTATT CATGCCGTAC CGCAGGTAGA TGTCCCCCTT 
CCGGCATCGC TTTCGCTGGG GCGCAGCGGT TTAAGCCAGC TTTTTGACGA AGGGACGTTT 
GATGTCATTG TTTGCAGTTC TGATACCCTG GCCCAGGGGG CGATGATGGA GGCGGAAAGC 
CGTGGTTTGC GCATCCCGCA TGATTTAGCG GTTATTGGTT TTGGCGACCT TGATTTTGCC 
GCCAGCAATC GACCGTCAAT TACTACCGTA AGCGTTGACA GACGCGCCAT TGGCCAGCGC 
GCCGCTACGC TGTTGGCCGA TCGTATTGAA CAGAAACCGT GCGCAGAAGC TATTGTGGAT 
ATTGGCTTTC ATTTGATTGA GCGAGAGTCC GCATAA
 
Protein sequence
MMNNARINQP IFAGASDVKR TKSPRAPTLE DVARSAGLSP MTVSRALNSP QLVRPKTVEK 
VMQAVRVTGY IPNALAGGLA SRRSKLIAVV VPQINNNMFV DTIQSLSDEL ARRGYHILLC 
VAGYTEQTEA ELVATLLSRR PDGVVLTGIH HTIELKKVIL NAAIPVVEIW DLTPTPLDML 
VGFSHEKVGQ ATGEYLLSKG YRRPGLLWTA DRRAAQRKQG LCSVLQRHAI HAVPQVDVPL 
PASLSLGRSG LSQLFDEGTF DVIVCSSDTL AQGAMMEAES RGLRIPHDLA VIGFGDLDFA 
ASNRPSITTV SVDRRAIGQR AATLLADRIE QKPCAEAIVD IGFHLIERES A