| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4062 |
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| Symbol | sgbE |
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| ID | 6874874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3904213 |
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| End bp | 3904908 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642787011 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_002217638 |
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| Protein GI | 198246054 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.612579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAGC AACTGAAAGC CGAGGTGCTG GCGGCCAACC TGGCCCTCCC GGCGCACGGG
CTGGTCACCT TTACCTGGGG CAACGTCAGC GCGGTCGATG AGACGCGCAA GCTGATGGTC
ATTAAGCCTT CCGGCGTCGA ATATGAGGTG ATGACCGCCG ACGATATGGT GGTGGTAGAG
ATCGCCAGCG GTAAGGTCGT TGAAGGCAAC AAAAAACCCT CGTCCGATAC CGCGACCCAT
CTGGCGCTCT ATCGCCGCTA TCCGCAGATC GGTGGGATCG TGCATACCCA TTCCCGCCAT
GCGACGATCT GGTCGCAGGC CGGGCTCGAT CTGCCCGCCT GGGGCACCAC CCACGCCGAC
TATTTCTATG GCGCGATCCC CTGTACCCGA CTGATGACCG TTGAGGAGAT TAACGGCGAG
TACGAGTATC AGACCGGCGA GGTGATTATT AAAACCTTTG AAGAGCGCGG TCTGGATCCG
GCGCAAATCC CGGCGGTATT AGTTCATTCA CACGGCCCGT TTGCCTGGGG TAAAAATGCC
GCCGATGCCG TCCACAACGC CGTGGTGCTT GAGGAGTGCG CCTATATGGG GCTGTTCTCG
CGCCAGCTGG CCCCCCAGCT GCCGGATATG CAGCCTGAAC TGCTCGATAA GCACTATCTG
CGTAAACATG GCGCGAATGC CTATTACGGG CAGTAA
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| Protein sequence | MLEQLKAEVL AANLALPAHG LVTFTWGNVS AVDETRKLMV IKPSGVEYEV MTADDMVVVE
IASGKVVEGN KKPSSDTATH LALYRRYPQI GGIVHTHSRH ATIWSQAGLD LPAWGTTHAD
YFYGAIPCTR LMTVEEINGE YEYQTGEVII KTFEERGLDP AQIPAVLVHS HGPFAWGKNA
ADAVHNAVVL EECAYMGLFS RQLAPQLPDM QPELLDKHYL RKHGANAYYG Q
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