Gene SeD_A4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4060 
SymbolsgbH 
ID6871957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3902704 
End bp3903366 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID642787009 
Product3-keto-L-gulonate-6-phosphate decarboxylase 
Protein accessionYP_002217636 
Protein GI198245769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC CATTACTGCA ACTGGCGCTC GACCACACCA GTCTGGAAGC AGCCCAACGC 
GATGTCGCCC TGCTACAGGA TCATGTCGAT ATCGTTGAGG CCGGAACCAT CCTTTGTTTA
ACCGAAGGCC TTAGCGCGGT GAAAGCCCTG CGAGCGCAGT GCCCGGAAAA AATCATCGTC
GCCGACTGGA AAGTGGCCGA TGCTGGTGAA ACCCTGGCGC AGCAGGCTTT TGGCGCTGGC
GCCAACTGGA TGACTATCAT CTGCGCCGCG CCGCTCGCGA CCGTCGAGAA AGGCCACGCC
GTCGCGCAAT CCTGCGGCGG TGAAATTCAA ATGGAGCTGT TCGGCAACTG GACGCTGGAC
GACGCCCGAG ACTGGTATCG CACCGGCGTG CGTCAGGCGA TTTATCATCG CGGACGCGAT
GCGCAGGCCA GCGGGCAACA GTGGGGAGAA GCGGACCTGG CACGCATGAA GGCGTTGTCC
GACATCGGCC TTGAACTATC GATTACCGGC GGCATTACCC CAGCGGATCT GCCGCTGTTC
CGCGACATTA ACGTTAAGGC ATTTATCGCC GGACGCGCGC TGGCAGGTGC CGCCCATCCG
GCGCAGGTCG CCGCCGAATT CCACGCCCAA ATTGACGCCA TTTGGGGAGA AAAGCATGCG
TAA
 
Protein sequence
MSRPLLQLAL DHTSLEAAQR DVALLQDHVD IVEAGTILCL TEGLSAVKAL RAQCPEKIIV 
ADWKVADAGE TLAQQAFGAG ANWMTIICAA PLATVEKGHA VAQSCGGEIQ MELFGNWTLD
DARDWYRTGV RQAIYHRGRD AQASGQQWGE ADLARMKALS DIGLELSITG GITPADLPLF
RDINVKAFIA GRALAGAAHP AQVAAEFHAQ IDAIWGEKHA