Gene SeD_A4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4053 
Symbol 
ID6875567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3895887 
End bp3896885 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content56% 
IMG OID642787002 
Product2,3-diketo-L-gulonate reductase 
Protein accessionYP_002217629 
Protein GI198244331 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.771616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.431121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA CTTTCGAAGA GTTAAAAGGG GCCTTCTACC GCGTCTTGCG GTCGCGGAAT 
ATTGCGGAAG ATACCGCCGA CGCCTGCGCG GAAATGTTCG CTCGCACCAC CGAGTCCGGT 
GTCTATTCCC ACGGCGTGAA CCGCTTTCCC CGCTTCATCC AGCAACTGGA TAACGGCGAC 
ATTATTCCTG ATGCTAAACC GCAGCGAGTT ACCAGCCTCG GCGCCATCGA ACAGTGGGAT 
GCTCAGCGCG CTATCGGCAA CCTGACGGCG AAAAAGATGA TGGACCGGGC CATCGAGCTG 
GCTTCCGATC ATGGTATTGG CCTGGTGGCG TTACGTAATG CTAACCACTG GATGCGCGGC 
GGCAGCTACG GCTGGCAGGC GGCGGAAAAA GGCTATATCG GCATTTGCTG GACCAACTCC 
ATCGCCGTCA TGCCGCCGTG GGGGGCGAAA GAGTGCCGTA TCGGTACCAA TCCGCTGATC 
GTCGCTATCC CTTCCACGCC GATCACGATG GTGGATATGT CGATGTCGAT GTTCTCCTAC 
GGAATGTTAG AAGTTAACCG TCTGGCGGGC CGCGAACTGC CGGTGGATGG CGGTTTCGAC 
GATAACGGTC AGTTGACCAA AGAACCGGGC GTTATCGAGA AAAATCGCCG CATTTTACCA 
ATGGGTTACT GGAAAGGATC TGGTCTGTCG ATTGTGCTGG ACATGATTGC CACCCTGCTT 
TCCAACGGCT CTTCCGTTGC CGAAGTGACC CAGGAAAACA GCGATGAGTA TGGCGTCTCA 
CAGATTTTCA TCGCCATAGA AGTGGATAAG CTGATCGATG GCGCAACCCG CGATGCCAAA 
CTGCAGCGGA TTATGGATTT CATCACCACT GCTGAACGCG CCGACGACAA CGTCGCGATT 
CGGCTGCCCG GCCACGAATT TACCAAATTG CTGGATGACA ACCGCCGTCA CGGTATCACC 
ATTGACGACA GCGTCTGGGC CAAAATTCAG GCGCTGTAA
 
Protein sequence
MKVTFEELKG AFYRVLRSRN IAEDTADACA EMFARTTESG VYSHGVNRFP RFIQQLDNGD 
IIPDAKPQRV TSLGAIEQWD AQRAIGNLTA KKMMDRAIEL ASDHGIGLVA LRNANHWMRG 
GSYGWQAAEK GYIGICWTNS IAVMPPWGAK ECRIGTNPLI VAIPSTPITM VDMSMSMFSY 
GMLEVNRLAG RELPVDGGFD DNGQLTKEPG VIEKNRRILP MGYWKGSGLS IVLDMIATLL 
SNGSSVAEVT QENSDEYGVS QIFIAIEVDK LIDGATRDAK LQRIMDFITT AERADDNVAI 
RLPGHEFTKL LDDNRRHGIT IDDSVWAKIQ AL