Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4006 |
Symbol | dppF |
ID | 6871063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3850105 |
End bp | 3851118 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642786960 |
Product | dipeptide transporter ATP-binding subunit |
Protein accession | YP_002217588 |
Protein GI | 198243967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGC ATGAGGCCAC CTTGCAACAG CCGCTGTTGC GGGCTATCGA CCTGAAAAAA CACTATCCGG TGAAGAAGGG GATCTTTTCT CCGGAACGGC TGGTAAAAGC GCTGGATGGC GTGTCGTTTA ATCTCGAACG CGGTAAAACG CTGGCGGTAG TGGGGGAGTC CGGTTGTGGA AAATCCACAC TGGGCCGCCT GCTGACGATG ATTGAAACGC CAACCGGCGG CGAGCTTTAT TACCAGGGGC AGGATCTGCT CAAACACGAT CCGCACGCGC AGAAACTGCG GCGGCAGAAA ATTCAGATTG TGTTTCAGAA CCCCTACGGT TCCCTGAACC CACGCAAGAA AGTGGGGCAA ATTCTGGAAG AGCCGTTGCT GATCAATACC AGCCTGAGTA AAGCGCAGCG TCGTGAAAAA GCGCTGGCGA TGATGGCGAA GGTGGGGCTG AAAACCGAGC ACTACGACCG CTATCCGCAT ATGTTCTCCG GCGGCCAGCG TCAGCGTATC GCTATCGCCC GCGGTCTGAT GCTTGATCCG GACGTAGTGA TTGCCGACGA ACCGGTCTCC GCGCTCGACG TGTCGGTGCG CGCCCAGGTG CTGAACCTGA TGATGGATTT GCAACAGGAT ATGGGGCTGT CTTATGTCTT TATCTCGCAC GACCTGTCGG TGGTGGAACA CATCGCCGAT GAAGTGATGG TCATGTACTT AGGCCGCTGC GTGGAGAAAG GGACCAAAGA GCAGATTTTT AACAATCCAC GTCATCCCTA TACCCAGGCG TTGCTCTCCG CCACGCCGCG GCTGAATCCG GACGATCGCC GTGAGCGGAT TAAGCTGACC GGCGAGTTGC CGAGTCCGCT GAACCCGCCG CCGGGCTGCG CCTTCAACGC CCGCTGCAGC CGTCGCTTCG GACCCTGTAC GCAGTTACAG CCGCAGCTTA AAGAGTACGA CGGCCAGTTG GTGGCCTGCT TTGCCGTCGA TCAGGATGAA AACCCGCAGA AACCGTTGAG TTAA
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Protein sequence | MSTHEATLQQ PLLRAIDLKK HYPVKKGIFS PERLVKALDG VSFNLERGKT LAVVGESGCG KSTLGRLLTM IETPTGGELY YQGQDLLKHD PHAQKLRRQK IQIVFQNPYG SLNPRKKVGQ ILEEPLLINT SLSKAQRREK ALAMMAKVGL KTEHYDRYPH MFSGGQRQRI AIARGLMLDP DVVIADEPVS ALDVSVRAQV LNLMMDLQQD MGLSYVFISH DLSVVEHIAD EVMVMYLGRC VEKGTKEQIF NNPRHPYTQA LLSATPRLNP DDRRERIKLT GELPSPLNPP PGCAFNARCS RRFGPCTQLQ PQLKEYDGQL VACFAVDQDE NPQKPLS
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