Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3990 |
Symbol | dctA |
ID | 6871655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3830045 |
End bp | 3831331 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642786946 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_002217574 |
Protein GI | 198246012 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.142242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT CTCTGTTCAA AAGTCTTTAT TTTCAGGTCC TGACAGCAAT CGCCATTGGT ATTCTCCTTG GCCATTACTA TCCTGAACTG GGCGCACAAA TGAAACCGCT TGGCGACGCG TTCGTTAAGC TCATTAAGAT GATCATCGCT CCTGTCATTT TCTGTACAGT CGTGACGGGC ATCGCAGGCA TGGAAAGCAT GAAAGCGGTG GGGCGTACCG GCGCGGTCGC GCTGCTTTAC TTTGAAATTG TCAGTACGAT TGCGCTGATT ATCGGTCTTA TCATCGTCAA CGTTGTGCAA CCTGGCGCCG GGATGAACGT CGATCCGGCA ACGCTGGATG CGCAGGCGGT GGCCGTTTAT GCCGCACAAG CCAAGGAGCA GGGCATTATT GCCTTCCTGA TGGATGTCAT ACCGGGCAGC GTGATCGGCG CGTTTGCCAG CGGCAACATT CTGCAGGTCT TACTGTTTGC GGTGTTGTTT GGTTTTGCGC TGCACCGTTT GGGCAGCAAA GGCCAGCTCA TTTTCAATGT GATTGAGAGT TTTTCGCAGG TCATTTTCGG CATCATCAAT ATGATCATGC GCCTGGCGCC GATTGGCGCA TTCGGCGCGA TGGCCTTCAC CATCGGTAAA TACGGCGTCG GTTCTCTGGT GCAACTGGGG CAGCTCATTA TCTGCTTCTA TATCACCTGT ATTCTCTTCG TGGTGGTGGT GCTGGGGACG ATTGCACGGG TAACGGGCTT TAGCATTTTT AAATTTATTC GCTATATCCG GGAAGAATTA CTCATTGTGC TCGGCACCTC CTCTTCCGAG TCAGCGTTGC CGCGTATGCT CGATAAGATG GAAAAACTGG GGTGCCGTAA ATCGGTGGTG GGGCTGGTGA TCCCGACGGG GTATTCGTTC AACCTTGATG GCACCTCTAT TTACCTGACG ATGGCGGCGG TGTTTATCGC CCAGGCGACC AACAGCCATA TGGATATCTT CCACCAGATA ACGCTACTGG TCGTGCTGCT GCTCTCGTCA AAAGGCGCCG CGGGCGTGAC CGGAAGCGGC TTTATTGTGC TGGCGGCCAC TATCTCCGCC GTGGGCCATT TACCGGTTGC GGGACTGGCG TTAATCCTTG GTATCGACCG CTTTATGTCC GAAGCGCGCG CGCTGACTAA CCTGGTGGGT AACGGCGTGG CGACGGTGGT GGTTGCCAAA TGGGTGAAAG AGTTAGATCA CCAAAAGCTG GACGATGTGC TTAATAATCG TGCGCCGGAT GGCAAAACGC ACGAAATTTC CTCCTAA
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Protein sequence | MKTSLFKSLY FQVLTAIAIG ILLGHYYPEL GAQMKPLGDA FVKLIKMIIA PVIFCTVVTG IAGMESMKAV GRTGAVALLY FEIVSTIALI IGLIIVNVVQ PGAGMNVDPA TLDAQAVAVY AAQAKEQGII AFLMDVIPGS VIGAFASGNI LQVLLFAVLF GFALHRLGSK GQLIFNVIES FSQVIFGIIN MIMRLAPIGA FGAMAFTIGK YGVGSLVQLG QLIICFYITC ILFVVVVLGT IARVTGFSIF KFIRYIREEL LIVLGTSSSE SALPRMLDKM EKLGCRKSVV GLVIPTGYSF NLDGTSIYLT MAAVFIAQAT NSHMDIFHQI TLLVVLLLSS KGAAGVTGSG FIVLAATISA VGHLPVAGLA LILGIDRFMS EARALTNLVG NGVATVVVAK WVKELDHQKL DDVLNNRAPD GKTHEISS
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