Gene SeD_A3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3990 
SymboldctA 
ID6871655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3830045 
End bp3831331 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content53% 
IMG OID642786946 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_002217574 
Protein GI198246012 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.142242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT CTCTGTTCAA AAGTCTTTAT TTTCAGGTCC TGACAGCAAT CGCCATTGGT 
ATTCTCCTTG GCCATTACTA TCCTGAACTG GGCGCACAAA TGAAACCGCT TGGCGACGCG
TTCGTTAAGC TCATTAAGAT GATCATCGCT CCTGTCATTT TCTGTACAGT CGTGACGGGC
ATCGCAGGCA TGGAAAGCAT GAAAGCGGTG GGGCGTACCG GCGCGGTCGC GCTGCTTTAC
TTTGAAATTG TCAGTACGAT TGCGCTGATT ATCGGTCTTA TCATCGTCAA CGTTGTGCAA
CCTGGCGCCG GGATGAACGT CGATCCGGCA ACGCTGGATG CGCAGGCGGT GGCCGTTTAT
GCCGCACAAG CCAAGGAGCA GGGCATTATT GCCTTCCTGA TGGATGTCAT ACCGGGCAGC
GTGATCGGCG CGTTTGCCAG CGGCAACATT CTGCAGGTCT TACTGTTTGC GGTGTTGTTT
GGTTTTGCGC TGCACCGTTT GGGCAGCAAA GGCCAGCTCA TTTTCAATGT GATTGAGAGT
TTTTCGCAGG TCATTTTCGG CATCATCAAT ATGATCATGC GCCTGGCGCC GATTGGCGCA
TTCGGCGCGA TGGCCTTCAC CATCGGTAAA TACGGCGTCG GTTCTCTGGT GCAACTGGGG
CAGCTCATTA TCTGCTTCTA TATCACCTGT ATTCTCTTCG TGGTGGTGGT GCTGGGGACG
ATTGCACGGG TAACGGGCTT TAGCATTTTT AAATTTATTC GCTATATCCG GGAAGAATTA
CTCATTGTGC TCGGCACCTC CTCTTCCGAG TCAGCGTTGC CGCGTATGCT CGATAAGATG
GAAAAACTGG GGTGCCGTAA ATCGGTGGTG GGGCTGGTGA TCCCGACGGG GTATTCGTTC
AACCTTGATG GCACCTCTAT TTACCTGACG ATGGCGGCGG TGTTTATCGC CCAGGCGACC
AACAGCCATA TGGATATCTT CCACCAGATA ACGCTACTGG TCGTGCTGCT GCTCTCGTCA
AAAGGCGCCG CGGGCGTGAC CGGAAGCGGC TTTATTGTGC TGGCGGCCAC TATCTCCGCC
GTGGGCCATT TACCGGTTGC GGGACTGGCG TTAATCCTTG GTATCGACCG CTTTATGTCC
GAAGCGCGCG CGCTGACTAA CCTGGTGGGT AACGGCGTGG CGACGGTGGT GGTTGCCAAA
TGGGTGAAAG AGTTAGATCA CCAAAAGCTG GACGATGTGC TTAATAATCG TGCGCCGGAT
GGCAAAACGC ACGAAATTTC CTCCTAA
 
Protein sequence
MKTSLFKSLY FQVLTAIAIG ILLGHYYPEL GAQMKPLGDA FVKLIKMIIA PVIFCTVVTG 
IAGMESMKAV GRTGAVALLY FEIVSTIALI IGLIIVNVVQ PGAGMNVDPA TLDAQAVAVY
AAQAKEQGII AFLMDVIPGS VIGAFASGNI LQVLLFAVLF GFALHRLGSK GQLIFNVIES
FSQVIFGIIN MIMRLAPIGA FGAMAFTIGK YGVGSLVQLG QLIICFYITC ILFVVVVLGT
IARVTGFSIF KFIRYIREEL LIVLGTSSSE SALPRMLDKM EKLGCRKSVV GLVIPTGYSF
NLDGTSIYLT MAAVFIAQAT NSHMDIFHQI TLLVVLLLSS KGAAGVTGSG FIVLAATISA
VGHLPVAGLA LILGIDRFMS EARALTNLVG NGVATVVVAK WVKELDHQKL DDVLNNRAPD
GKTHEISS