Gene SeD_A3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3920 
Symbol 
ID6874851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3758168 
End bp3759139 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content52% 
IMG OID642786879 
Productputative inner membrane protein 
Protein accessionYP_002217507 
Protein GI198245762 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.324261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA ATAAGTACTC AACCCCCTTA CTGATGCTTG CCACCATCTT AGCCGGTATG 
CTTTCCCCGA TGCAGTCTGC CGTTAATGGG CAGTTAGGAC ATTGGTTACA AGACGGTAAT 
GCTTGCGCAG TAATCTCGTT TGCCAGCGGT CTGGTCGTCA TGTTTTTTAT TATTATTGCG 
CGCAAAGAAA CACGCCAGCA ATTCGCCTCA ATCCCTACTC TGATTAAAAA GAGAAAAATC 
CCGCTATGGA ATTGGTTTGC AGGATTATGC GGGGCTATGG TCGTATTTTC TGAAGGCGCA 
TCCGCCAGCG CGCTGGGCGT TGCCACCTTT CAAACGGCAT TAATTTCTGC CCTGCTTCTT 
TCCGGCCTGC TGTGCGACCG TTTTGGCATC GGTGTGGAGG AGAAGAAATA TTTTACGCCA 
TGGCGCATTA CTGGCGCATT GTTCGCCGTT ATCGCCACCA TTTTTGTCGT GTCGCCACAG 
TGGCACTCAA CCTCGTTTAT CCTGCTCGCT ATCCTCCCCT TTTTGGCAGG GTTACTCGCT 
GGCTGGCAGC CTGCGGGGAA TGCGAAAGTC GCCGAGGCAA CGGGCTCCAT GCTGGTGTCC 
ATTACATGGA ACTTCATCGT CGGCTTTTGT GTCCTGGGCG CAGCGCTGGC GATACGTATC 
GCATTAGGCC ATGTCACCAT TCAGTTACCC GATACATGGT GGATGTATCT CGGTGGTCCG 
CTGGGTCTGC TGTCCATCGG GCTAATGGCG ATTCTGGTGA GAGGCTTAGG GCTATTGATG 
CTGGGCGTAG CGTCAACAGC AGGCCAACTG CTTGGCTCAG TGCTAATTGA TGAATTGATC 
CCTTCATTAG GCAATACGGT CTACCTGGTC ACCATCATCG GTACGCTGTT CGCGTTAGTC 
GGTGCGATTG TGACCACCAT CCCTGAATAC AGAGCATCCA AAATGGCGCA AAGAATGGAG 
GTGTCAGAAT GA
 
Protein sequence
MNKNKYSTPL LMLATILAGM LSPMQSAVNG QLGHWLQDGN ACAVISFASG LVVMFFIIIA 
RKETRQQFAS IPTLIKKRKI PLWNWFAGLC GAMVVFSEGA SASALGVATF QTALISALLL 
SGLLCDRFGI GVEEKKYFTP WRITGALFAV IATIFVVSPQ WHSTSFILLA ILPFLAGLLA 
GWQPAGNAKV AEATGSMLVS ITWNFIVGFC VLGAALAIRI ALGHVTIQLP DTWWMYLGGP 
LGLLSIGLMA ILVRGLGLLM LGVASTAGQL LGSVLIDELI PSLGNTVYLV TIIGTLFALV 
GAIVTTIPEY RASKMAQRME VSE