Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3902 |
Symbol | |
ID | 6872992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3736783 |
End bp | 3737688 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642786862 |
Product | dihydrodipicolinate synthetase |
Protein accession | YP_002217490 |
Protein GI | 198243099 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGA TTACGAAATT TCACGGCGTA TTTCCGCCAG TTCCGACCAT TGTTAATGCG CAGGGAGAGT TAGATAAAGT CGGCATGGCA ACCTTGCTGG ATCATCTTAT TGCAAGCAAG GTCAATGGCG TATTACTGCT GGGCAGCGGG GGGGAATTTT GCCATATGAC CAATGCGCTG CGTCTGGAAA CCGCAGAGTT TTGCGTCCGT CATATTAACC GCCGTATTCC AGTACTATTA GGTATTAGCA GCACCAGCAC GCAGGAAGTG ATTGAGTATG GTCAGCATGC CGACCGACTC GAAGTCGATG CCGTGCTGGT ACTCAATCCC TACTATGCCA GATTGACCGA TGAGTATATT TATCATCATT TCAAAACCGT GGCTAATAAC ATAAAAAGCC CGGTCATTCT CTACAACTTT CCAGCATTGA CGGGACAGGA CCTTAGCGTT GATTTAATTA CCCGGCTGGC GCAGGATCAC CCCAATATTA TCGGCATTAA GGATACCGTT GATAATATCA GCCATATTCG TGAAATCATC AATAATGTCA GGCCAGTGCG TCCGGACTTC GTTATTTTCT CCGGCTATGA TGAATATATG ATGGATACAC TTATCTTAGG CGGCAACGGC GGGATCCCAG CGACAGCGAA CTTTGCGCCG CAGCTAACCT GCGGGATCTA CCGCGCGTGG TGTGAAAAAG AGTATGAGAC AATGTTCGGA TTACAGCGCC GGCTGTCCGC GCTTTCCACT ATTTACAGCC TGGATTCACC TTTCTTCGGG ATAATCAAAA AGGCAATTCA GCTTAGCGGA GTCGATATTT CAACTCATGT AATGCCCCCC GTTTTGCCGG CAAATGAAGA ACATATTTCG AATTTGAAGC AGATCTTACA GCGTGCGGGA CTTTAA
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Protein sequence | MTQITKFHGV FPPVPTIVNA QGELDKVGMA TLLDHLIASK VNGVLLLGSG GEFCHMTNAL RLETAEFCVR HINRRIPVLL GISSTSTQEV IEYGQHADRL EVDAVLVLNP YYARLTDEYI YHHFKTVANN IKSPVILYNF PALTGQDLSV DLITRLAQDH PNIIGIKDTV DNISHIREII NNVRPVRPDF VIFSGYDEYM MDTLILGGNG GIPATANFAP QLTCGIYRAW CEKEYETMFG LQRRLSALST IYSLDSPFFG IIKKAIQLSG VDISTHVMPP VLPANEEHIS NLKQILQRAG L
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