| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3881 |
|---|
| Symbol | gntY |
|---|
| ID | 6874179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 3709394 |
|---|
| End bp | 3709969 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642786843 |
|---|
| Product | putative DNA uptake protein |
|---|
| Protein accession | YP_002217471 |
|---|
| Protein GI | 198244988 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
|---|
| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
|---|
| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTA TTTCCGATGC TGCACAAGCG CACTTTGCCA AACTGCTGGC AAATCAGGAA
GAAGGGACGC AAATCCGCGT ATTTGTCATT AATCCCGGCA CTCCTAACGC AGAGTGCGGT
GTTTCTTATT GTCCGCCCGA CGCCGTAGAA GCCACCGATA CTGCACTGAA ATTTGACCTG
TTGACCGCTT ATGTCGATGA ACTGAGCGCG CCCTATCTGG AAGACGCGGA AATTGATTTC
GTGACCGACC AGCTAGGTTC TCAACTTACA TTGAAAGCGC CAAACGCGAA GATGCGCAAA
GTGGCCGATG ACGCGCCGCT GATGGAGCGC GTGGAATATG CTCTGCAATC GCAGATTAAC
CCGCAGTTGG CGGGCCACGG CGGTCGCGTC TCGCTGATGG AAATTACCGA TGAAGGCTAT
GCAATTCTGC AGTTTGGCGG CGGTTGTAAC GGTTGCTCGA TGGTTGACGT CACGCTGAAA
GAAGGGATCG AGAAACAGTT GCTGAATGAA TTCCCGGAAC TGAAAGGGGT TCGCGATCTG
ACCGAACACC AGCGCGGCGA GCACTCCTAC TACTAA
|
|---|
| Protein sequence | MIRISDAAQA HFAKLLANQE EGTQIRVFVI NPGTPNAECG VSYCPPDAVE ATDTALKFDL
LTAYVDELSA PYLEDAEIDF VTDQLGSQLT LKAPNAKMRK VADDAPLMER VEYALQSQIN
PQLAGHGGRV SLMEITDEGY AILQFGGGCN GCSMVDVTLK EGIEKQLLNE FPELKGVRDL
TEHQRGEHSY Y
|
|---|
| |