Gene SeD_A3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3867 
SymbolhslO 
ID6874764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3693423 
End bp3694307 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID642786829 
ProductHsp33-like chaperonin 
Protein accessionYP_002217457 
Protein GI198245919 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.478877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGC CGCAACATGA CCAATTACAT CGTTATCTGT TTGAAAACTT TGCCGTTCGC 
GGCGAGCTGG TAACCGTTTC GGAAACCTTG CAACAGATCC TCGACAATCA TAACTATCCG
CAGCCGGTGA AAACTGTACT GGCCGAACTG CTGGTCGCCA CTAGCCTGCT GACCGCGACG
CTGAAGTTTG CTGGTGACAT TACGGTACAG CTCCAGGGCG ACGGGCCGTT AAGCCTGGCG
GTGATCAATG GCAATAATCA GCAGCAGATG CGCGGCGTGG CTCGCGTTCA GGGCGACATC
CCTGACAATG CGGATCTCAA AACGCTGGTT GGCAACGGCT ATCTGGTGAT CACCATTACG
CCGGAAGAGG GTGAACGCTA TCAGGGCGTG GTGGGTCTGG AAGGCGATAC TCTGGCGGCG
TGCCTGGAAG ATTACTTCCT GCGCTCCGAG CAGTTGCCGA CGCGCCTGTT TATCCGTACC
GGCGATGTCG ACGGTAAACC GGCGGCAGGT GGAATGTTGC TCCAGGTGAT GCCGGCACAG
AACGCGCAGG CGGAGGATTT CGACCATCTG GCTATGTTGA CGGAAACCAT TAAAAGCGAA
GAGCTGCTGA CGTTACCGGC AAATGACGTG CTGTGGCGTT TGTATCACGA AGAAGAAGTC
ACACTCTACG ATCCGCAAGA TGTTGAGTTC AAATGCACCT GTTCACGCGA ACGTTGCGCG
GGCGCGCTGA AAACATTGCC GGATGAAGAA GTGGACAGCA TTCTGGCGGA AGACGGCGAA
ATCGATATGC ACTGCGATTA CTGCGGCAAT CATTACCTGT TCAATGCGAT GGATATCGCG
GAGATCCGTA ACAACGCCTC TCCTGCCGAT CCACAGGTTC ACTAA
 
Protein sequence
MIMPQHDQLH RYLFENFAVR GELVTVSETL QQILDNHNYP QPVKTVLAEL LVATSLLTAT 
LKFAGDITVQ LQGDGPLSLA VINGNNQQQM RGVARVQGDI PDNADLKTLV GNGYLVITIT
PEEGERYQGV VGLEGDTLAA CLEDYFLRSE QLPTRLFIRT GDVDGKPAAG GMLLQVMPAQ
NAQAEDFDHL AMLTETIKSE ELLTLPANDV LWRLYHEEEV TLYDPQDVEF KCTCSRERCA
GALKTLPDEE VDSILAEDGE IDMHCDYCGN HYLFNAMDIA EIRNNASPAD PQVH