Gene SeD_A3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3841 
SymboltsgA 
ID6874582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3662869 
End bp3664050 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content55% 
IMG OID642786806 
Producthypothetical protein 
Protein accessionYP_002217434 
Protein GI198245921 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.933183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA GCAACCGCAT CAAGCTCACA TGGATCAGCT TTCTTTCCTA CGCCCTGACC 
GGGGCGCTGG TGATTGTCAC CGGGATGGTG ATGGGAAATA TCGCAGACTA TTTTCATCTG 
CCCGTTTCCA GCATGAGTAA CACCTTTACT TTTCTGAACG CCGGGATTTT GATCTCGATC 
TTCCTCAACG CGTGGCTGAT GGAAATCGTC CCGCTGAAAA CACAGCTACG CTTTGGTTTT 
ATCCTGATGG TGCTGGCGGT GGCCGGGCTG ATGTTCAGCC ATAGCCTGGC GTTGTTCTCA 
GCGGCGATGT TTGTGCTGGG GCTGGTCAGC GGGATCACCA TGTCGATTGG CACCTTCCTG 
ATTACGCAAC TGTATGAAGG GCGTCAGCGC GGTTCCCGAC TGCTGTTTAC CGACTCCTTC 
TTCAGCATGG CGGGGATGAT TTTTCCTATG GTCGCCGCCT TCCTGCTGGC GCGTAGTATT 
GAGTGGTACT GGGTCTACGC CTGCATCGGC CTGGTCTACC TGGCGATTTT CATCCTGACC 
TTCGGCTGTG AATTTCCGGC GCTGGGTAAA CATGCGCAGC ACTCTCAGGC GCCTGTCGCC 
AAAGAAAAAT GGGGCATTGG CGTACTGTTT CTGGCCGTCG CCGCGCTGTG CTATATCCTC 
GGTCAATTAG GCTTTATCTC CTGGGTGCCG GAATACGCCA AAGGCCTCGG CATGAGCCTG 
AATGACGCCG GGGCGCTGGT GAGTGATTTC TGGATGTCCT ATATGTTTGG CATGTGGGCG 
TTCAGCTTTA TCCTGCGCTT TTTCGATCTG CAACGCATTC TGACCGTACT GGCGGGTATG 
GCGGCGGTAC TGATGTATCT GTTTATTACC GGCACGCAGG CGCATATGCC GTGGTTTATT 
CTGACGCTGG GCTTCTTCTC CAGCGCCATT TATACCTCCA TCATTACGCT GGGATCGCAG 
CAAACGAAAG TGGCCTCGCC TAAGCTGGTT AACTTTATTC TGACCTGCGG CACTATCGGA 
ACGATGCTGA CCTTCGTCGT CACCGGCCCG ATTGTAGCGC ACAGCGGCCC ACAGGCGGCG 
TTACTCACCG CGAATGGTCT GTATGCAGTG GTCTTTGTGA TGTGCTTTGC GCTCGGCTTT 
GTCTCCCGTC ATCGTCAGCA TAGCGCGCCG GCTACGCATT GA
 
Protein sequence
MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFHL PVSSMSNTFT FLNAGILISI 
FLNAWLMEIV PLKTQLRFGF ILMVLAVAGL MFSHSLALFS AAMFVLGLVS GITMSIGTFL 
ITQLYEGRQR GSRLLFTDSF FSMAGMIFPM VAAFLLARSI EWYWVYACIG LVYLAIFILT 
FGCEFPALGK HAQHSQAPVA KEKWGIGVLF LAVAALCYIL GQLGFISWVP EYAKGLGMSL 
NDAGALVSDF WMSYMFGMWA FSFILRFFDL QRILTVLAGM AAVLMYLFIT GTQAHMPWFI 
LTLGFFSSAI YTSIITLGSQ QTKVASPKLV NFILTCGTIG TMLTFVVTGP IVAHSGPQAA 
LLTANGLYAV VFVMCFALGF VSRHRQHSAP ATH