| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3840 |
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| Symbol | ppiA |
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| ID | 6874334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3662020 |
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| End bp | 3662592 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642786805 |
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| Product | peptidyl-prolyl cis-trans isomerase A (rotamase A) |
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| Protein accession | YP_002217433 |
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| Protein GI | 198245148 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.740676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAAT CGACTCTGGC GGCTGTCGCA GCTGTTTTCG CTCTTTCTGC TCTTTCTCCC
GTAGCGTTGG CAGCAAAAGG TGATCCTCAT GTGCTGTTAA CCACCTCCGC CGGGAATATT
GAGCTGGAGC TGAACAGCCA GAAAGCGCCG ATTTCTGTGA AAAACTTTGT CGATTACGTC
AACAGTGGTT TCTATAACAA CACTACGTTT CACCGAGTTA TTCCTGGCTT TATGATTCAG
GGCGGTGGTT TTAACGAGCA GATGCAGCAG AAGAAACCGA ATCCGCCGAT TAAGAATGAA
GCCGACAACG GTCTGCGTAA TACTCGCGGC ACGATCGCGA TGGCGCGCAC CGCAGATAAA
GACAGCGCCA CCAGCCAGTT CTTTATTAAC GTCGCGGATA ACGCTTTTCT CGACCACGGC
CAGCGCGACT TTGGCTATGC GGTATTTGGT AAAGTGGTAA AAGGTATGGA TGTCGCCGAT
AAAATCTCAC AGGTACCGAC GCACGATGTC GGGCCTTATC AGAATGTGCC GACAAAACCA
GTCGTTATCC TTTCCGCGAA AGTCCTGCCA TAA
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| Protein sequence | MLKSTLAAVA AVFALSALSP VALAAKGDPH VLLTTSAGNI ELELNSQKAP ISVKNFVDYV
NSGFYNNTTF HRVIPGFMIQ GGGFNEQMQQ KKPNPPIKNE ADNGLRNTRG TIAMARTADK
DSATSQFFIN VADNAFLDHG QRDFGYAVFG KVVKGMDVAD KISQVPTHDV GPYQNVPTKP
VVILSAKVLP
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