Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3832 |
Symbol | |
ID | 6872768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3654766 |
End bp | 3655635 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642786797 |
Product | phosphoribulokinase/uridine kinase family protein |
Protein accession | YP_002217425 |
Protein GI | 198242648 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCA AACATCCGGT GATAGCAGTA ACAGGGTCAA GCGGCGCGGG GACCACCACC ACCAGCCTCG CGTTTCGTAA AATTTTCGCG CAGTTAAATC TGCACGCCGC CGAGGTGGAA GGCGACAGTT TTCATCGTTA CACCCGCCCG GAAATGGATA TGGCGATCCG CAAAGCGCGT GACGCCGGGC GGCATATCAG CTATTTCGGG CCTGAAGCCA ATGACTTCAG CCTACTGGAA CATACCTTTA TTGAGTACGG GCAGACGGGT AAAGGCCAGT CGCGTAAATA TCTGCATACC TATGATGAAG CCGTACCGTG GAATCAGGTT CCCGGCACGT TTACCCCCTG GCAGCCGCTT CCCGAACCGA CCGATGTGCT GTTTTATGAA GGACTGCACG GCGGCGTCGT CACCCCGCAA CATGATGTCG CGCGTCATGT TGATCTGTTG GTTGGCGTGG TGCCTATCGT CAACCTCGAG TGGATTCAGA AACTGATTCG CGACACCAGC GAGCGCGGAC ACTCCCGTGA AGCGGTGATG GATTCCGTGG TGCGTTCCAT GGACGACTAC ATCAATTACA TTACGCCGCA GTTCTCGCGT ACCCATATCA ACTTCCAGCG CGTACCGACC GTCGACACGT CCAATCCGTT CGCCGCAAAG GGTATTCCCT CGCTGGATGA GAGTTTTGTG GTGATCCATT TCCGCAATCT GGAAGGGATC GATTTTCCCT GGCTCCTGGC GATGCTCCAG GGCTCGTTCA TTTCTCACAT TAATACATTA GTGGTGCCGG GCGGCAAAAT GGGGCTGGCG ATGGAGCTGA TTATGTTGCC GCTGGTGCAG CGATTAATGG AAGGCAAAAA AATCGAATAA
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Protein sequence | MSAKHPVIAV TGSSGAGTTT TSLAFRKIFA QLNLHAAEVE GDSFHRYTRP EMDMAIRKAR DAGRHISYFG PEANDFSLLE HTFIEYGQTG KGQSRKYLHT YDEAVPWNQV PGTFTPWQPL PEPTDVLFYE GLHGGVVTPQ HDVARHVDLL VGVVPIVNLE WIQKLIRDTS ERGHSREAVM DSVVRSMDDY INYITPQFSR THINFQRVPT VDTSNPFAAK GIPSLDESFV VIHFRNLEGI DFPWLLAMLQ GSFISHINTL VVPGGKMGLA MELIMLPLVQ RLMEGKKIE
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