Gene SeD_A3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3830 
Symbol 
ID6875017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3653541 
End bp3654500 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID642786795 
Productputative hydrolase 
Protein accessionYP_002217423 
Protein GI198243941 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGCA TTCGTAATCG CCATTTACAA ACTATGCTGC CGCGCTTAAT CCGCCGCAAA 
GTGAAGTTCA ACGCCCACTG GCAGCGGCTG GAGCTACCGG ACGGCGATTT TGTCGATCTG
GCATGGAGCG AAGAACCGCA ACAGGCAAAG CATAAACCGC GGCTGGTGGT CTTTCACGGT
CTGGAAGGCA GCCTGAACAG CCCCTATGCC CACGGGCTGA TTGAGGCGGC GCAAAAGCGC
GGCTGGCTGG GCGTGGTGAT GCACTTTCGC GGCTGTAGCG GCGAACCCAA CCGTCTGAAT
CGTATTTACC ACTCCGGTGA AACGGAGGAC GGAGCCTGGT TTTTACGCTG GCTACAGCGG
GAGTTCGGCG CCGTTCCGAC AGCCGCCGTG GGCTATTCGC TCGGCGGTAA TATGCTGGCG
TGCCTGCTGG CGAAAGAAGG CCGCGATATT CCCATCGAGG CGGCGGTAAT TGTTTCTGCA
CCTTTCGTTC TCGAAGCCTG TAGCTACCAC ATGGACAAAG GGTTTTCCCG CGTCTATCAG
CGTTATTTGC TTAATCTGTT AAAAGCGAAT GCGTCACGCA AGCTGGCGGC GTACCCCGGG
TCGCTGCCGG TGAATCTGGC GCAACTGAAA TCAATGCGCC GTATTCGCGA GTTTGACGAC
CTGATCACCG CGAAAATTCA CGGCTTTGCC GACGCCATCG ACTACTATCG TCAGTGTAGC
GCCATGCCGT TGCTTAACCA GATTGCTAAA CCGACGCTGA TTATTCACGC TAAAGACGAT
CCGTTTATGG ATCATCATGT GATCCCTAAA GCGGAAGATC TGCCCCCGCA GGTGGAGTAT
CAGCTAACTG AGCATGGCGG ACACGTAGGA TTTATCGGCG GTACGCCGCT GCGCCCTGAA
ATGTGGCTGG AACGCCGAAT TCCTGACTGG CTGACAACGT ACCTGGAGGC GTCATCATGA
 
Protein sequence
MRGIRNRHLQ TMLPRLIRRK VKFNAHWQRL ELPDGDFVDL AWSEEPQQAK HKPRLVVFHG 
LEGSLNSPYA HGLIEAAQKR GWLGVVMHFR GCSGEPNRLN RIYHSGETED GAWFLRWLQR
EFGAVPTAAV GYSLGGNMLA CLLAKEGRDI PIEAAVIVSA PFVLEACSYH MDKGFSRVYQ
RYLLNLLKAN ASRKLAAYPG SLPVNLAQLK SMRRIREFDD LITAKIHGFA DAIDYYRQCS
AMPLLNQIAK PTLIIHAKDD PFMDHHVIPK AEDLPPQVEY QLTEHGGHVG FIGGTPLRPE
MWLERRIPDW LTTYLEASS