Gene SeD_A3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3820 
Symbol 
ID6872903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3644671 
End bp3645393 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID642786786 
Producthypothetical protein 
Protein accessionYP_002217414 
Protein GI198246219 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000148293 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.984767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGT CGCTTTTAAC CAACGAAACC AGTGAACTTG ATTTGCTGGA TCAGCGTCCC 
TTCGAGCAAA CCGACTTCGA TATTCTGAAA TCCTACGAAG CGGTAGTGGA CGGGTTAGCG 
ATGCTTATAG GTTCCCATTG TGAAATCGTA TTGCACTCTT TGCAGGATCT AAAATGTTCA 
GCCATTCGTA TTGCCAATGG CGAACATACG GGCCGTAAAA TTGGCTCGCC GATTACCGAC 
CTGGCGTTGC GTATGTTGCA CGACATGACA GGGGCGGACA GTAGCGTGTC GAAATGCTAT 
TTCACGCGCG CGAAAAGCGG TGTCTTGATG AAGTCGTTGA CGATTGCCAT TCGCAACCGC 
GAGCAGCGCG TCATTGGTCT ACTGTGCATC AACATGAATC TTGATGTGCC ATTTTCACAG 
ATTATGAATA CCTTTATTCC GCCGGAAACG CCGGAAGTCG GCTCAGCGGT TAATTTTGCC 
TCCTCAGTCG AAGATTTAGT CACCCAGACG CTGGAGTTCA CGATCGAAGA AGTGAATGCC 
GATCGTAATG TCTCTAACAA TGCGAAAAAT CGTCAGATCG TCCTTAACTT GTACGAAAAA 
GGCATTTTCG ATATTAAAGA CGCCATTAAC CAGGTAGCCG ATCGTCTGAA TATCTCAAAA 
CACACGGTTT ACCTCTATAT TCGCCAGTTC AAAAGCGGCG ATTTTCAGGG GCAGGATAAA 
TAA
 
Protein sequence
MSRSLLTNET SELDLLDQRP FEQTDFDILK SYEAVVDGLA MLIGSHCEIV LHSLQDLKCS 
AIRIANGEHT GRKIGSPITD LALRMLHDMT GADSSVSKCY FTRAKSGVLM KSLTIAIRNR 
EQRVIGLLCI NMNLDVPFSQ IMNTFIPPET PEVGSAVNFA SSVEDLVTQT LEFTIEEVNA 
DRNVSNNAKN RQIVLNLYEK GIFDIKDAIN QVADRLNISK HTVYLYIRQF KSGDFQGQDK