Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3672 |
Symbol | |
ID | 6872037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3519780 |
End bp | 3520592 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642786650 |
Product | putative ABC transporter ATP-binding protein YrbF |
Protein accession | YP_002217284 |
Protein GI | 198242251 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.0355723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGT CTGCGGCCAA TTTAGTCGAT ATGCGCGACG TCAGCTTTTC CCGTGGCGAA CGCTGCATTT TCGATAATAT TTCCCTGACG GTGCCGCGCG GGAAGATCAC GGCGATCATG GGGCCGTCGG GCATCGGTAA AACCACGCTG TTGCGCCTGA TTGGCGGACA GATCCCGCCG GATAAGGGCG AGATCTTATT TGATGGCGAG AATGTGCCGG CCATGTCCCG TTCGCGGCTC TACACCGTCC GCAAACGTAT GAGTATGCTG TTTCAGTCGG GAGCGCTGTT TACCGACATG AACGTGTTTG ACAATGTGGC CTATCCGCTA CGGGAGCACA CCAATTTACC CGCGCCGCTG CTAAAAAGCG TCGTGATGAT GAAACTGGAA GCTGTCGGGC TGCGCGGCGC GGCAAAACTG ATGCCTTCCG AGCTCTCCGG TGGGATGGCG CGCCGCGCCG CGTTGGCGCG CGCCATCGCT CTGGAACCGG ATCTCATCAT GTTCGATGAG CCGTTTGTCG GCCAGGACCC GATTACCATG GGCGTTCTGG TGAAGCTGAT TTCAGAATTG AACAGCGCGC TGGGCGTGAC CTGCGTGGTG GTCTCGCATG ATGTGCCAGA GGTGCTCAGT ATTGCTGATC ACGCCTGGAT CATGGCGGAC AAAAAAATCG TCGCTCACGG TAGCGCTCAG GCGTTGCAGG AGAATACGGA CCCGCGCGTG CGTCAGTTCC TTGACGGCAT TGCCGACGGG CCGGTTCCGT TCCGCTATCC GGCGGGCGAC TATCACCTTG ATTTACTCGA AACAGGGAGT TAA
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Protein sequence | MGQSAANLVD MRDVSFSRGE RCIFDNISLT VPRGKITAIM GPSGIGKTTL LRLIGGQIPP DKGEILFDGE NVPAMSRSRL YTVRKRMSML FQSGALFTDM NVFDNVAYPL REHTNLPAPL LKSVVMMKLE AVGLRGAAKL MPSELSGGMA RRAALARAIA LEPDLIMFDE PFVGQDPITM GVLVKLISEL NSALGVTCVV VSHDVPEVLS IADHAWIMAD KKIVAHGSAQ ALQENTDPRV RQFLDGIADG PVPFRYPAGD YHLDLLETGS
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