Gene SeD_A3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3542 
Symbol 
ID6873027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3399209 
End bp3399997 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content57% 
IMG OID642786532 
Producthypothetical protein 
Protein accessionYP_002217169 
Protein GI198243154 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAA CGTGTATGCC AGCATTGTTT TTGGGGCATG GCAGCCCGAT GAACGTGCTG 
GACGATAATG ATTATACCCG CGCCTGGCGG CGATTGGGGG AAGCCCTGCC GCGACCACAG 
GCGATAGTGG TGGTGTCGGC GCATTGGTAT ACCCGCGGGA CGGGCGTCAC AGCGATGGAA 
AGGCCGCAAA CTCTCCATGA TTTTGGCGGT TTTCCGCAGG CGCTGTATGA CACGCATTAT 
CCGGCCCCTG GATCGCCTGC GCTGGCGCAG CGTCTGGTTG AACTGTTGGC TCCCGTTCCC 
GTCGCGCTCG ATAAAGAAGC GTGGGGATTT GATCACGGCT CCTGGGGCGT ATTGATCAAG 
ATGTATCCGA ATGCGGATAT CCCGATGGTG CAGCTTAGTG TTGATAGTAC CAAACCGGCG 
GCATGGCATT TTGAGGTGGG CCGTAAACTG GCGACGCTGC GTGACGAAGG CGTGATGCTG 
GTGGCCAGCG GGAATGTGGT TCATAACCTG CGGACTGTGC GTTGGCACGG TGACAATATA 
CCGTATCCCT GGGCGGCGTC ATTTAATGAC TTTGTGAAAG CCAATCTGAC GTGGCAGGGG 
CCGGTAGAAC AGCACCCGCT GGTGAATTAT CTGCAACATG AAGGGGGGGC CTTATCGAAC 
CCGACGCCGG AGCACTTTTT ACCTTTGCTG TATGTACTTG GCGCCTGGGA CGGCAAGGAA 
CCTATCACCA TCCCGGTCGA CGGTATTGAG ATGGGCAGTA TAAGTATGTT GTCGGTGCAG 
GTGGGGTAG
 
Protein sequence
MSLTCMPALF LGHGSPMNVL DDNDYTRAWR RLGEALPRPQ AIVVVSAHWY TRGTGVTAME 
RPQTLHDFGG FPQALYDTHY PAPGSPALAQ RLVELLAPVP VALDKEAWGF DHGSWGVLIK 
MYPNADIPMV QLSVDSTKPA AWHFEVGRKL ATLRDEGVML VASGNVVHNL RTVRWHGDNI 
PYPWAASFND FVKANLTWQG PVEQHPLVNY LQHEGGALSN PTPEHFLPLL YVLGAWDGKE 
PITIPVDGIE MGSISMLSVQ VG