Gene SeD_A3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3517 
Symbol 
ID6871239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3374980 
End bp3375435 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content48% 
IMG OID642786507 
Producthypothetical protein 
Protein accessionYP_002217144 
Protein GI198241941 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.810284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCA TTTTCTGTCA AATAGTTGAA GGTAAAGCAC CTTGTCATAA AGTTTGGGAA 
GATGAGCATC ACCTGGCTTT TTTGTCGATT TTTCCGAATA CCGATGGGTT TACCGTAGTG
ATCCCGAAAA AACATTACCC CAGCTACGCG TTCGATCTAC CGCCGCAGGC GTTAGCGGAC
CTGATGCTGG CGACCCAAAA AGTGGCTAAG AAACTGGATA AGGCTTTCCC GGATGTCAGT
CGTACGGGAA TGTTCTTCGA AGGTTTCGGC GTAGACCATG TGCACAGTAA ATTAAGCCCC
ATGCACGGTA CTGGCGATTT AACCCACTGG AAACCGATTG AATCGCGGCA GAATAAATTT
TTCGAACAGT ATGAAGGATA TCTGTCGTCA CACGATCATG AACGGGCTGA TGATGAAAAA
CTGGCCGCGC TGGCGGCCAG AATTCGTGAG GCATAA
 
Protein sequence
MTCIFCQIVE GKAPCHKVWE DEHHLAFLSI FPNTDGFTVV IPKKHYPSYA FDLPPQALAD 
LMLATQKVAK KLDKAFPDVS RTGMFFEGFG VDHVHSKLSP MHGTGDLTHW KPIESRQNKF
FEQYEGYLSS HDHERADDEK LAALAARIRE A