Gene SeD_A3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3508 
SymbolexbB 
ID6872324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3367060 
End bp3367794 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID642786500 
Productbiopolymer transport protein ExbB 
Protein accessionYP_002217137 
Protein GI198244982 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAATA ATTTGATGCA GACGGATCTT TCCGTCTGGG GCATGTATCA GCACGCCGAT 
ATTGTCGTGA AGTGCGTGAT GATTGGTTTG ATTCTGGCGT CAGTCGTCAC CTGGGCTATC
TTCTTCAGTA AAAGCGTTGA ATTTTTCACG CAAAAGCGCC GCTTAAAGCG CGAACAACTG
CAATTAGCCG ATGCGCGCTC TTTAGATCAG GCTTCCGACA TTGCGGCAGG TTTCAGCGCA
AAAAGCCTCA GCGCACAGCT CATCAATGAA GCGCAGAATG AACTGGAACT CTCTCAGGGC
AGCGAAGATA ACGAAGGGAT TAAAGAACGT ACCGGCTTCC GTCTGGAACG TCGCGTCGCA
GCGGTTGGCC GCTACATGGG ACGAGGCAAC GGTTATCTGG CGACGATCGG CGCCATTTCC
CCCTTCGTCG GGTTGTTTGG CACCGTATGG GGCATTATGA ATAGCTTCAT CGGTATTGCG
CAAACGCAGA CCACCAACCT GGCGGTGGTC GCTCCTGGTA TTGCGGAAGC GCTGCTGGCG
ACGGCGATTG GGCTGGTAGC CGCGATCCCG GCGGTCGTCA TTTACAACAT CTTCGCACGT
CAGATAGGCA GTTACAAAGC GACGCTGGGT GACGTGGCGG CGCAGGTATT GCTGCTGCAA
AGCCGCGATC TTGATCTGAA TGCGAGCGCC AGTGCGCAGC CGGTACGCGC CGCGCAGAAA
TTACGGGTAG GGTAA
 
Protein sequence
MGNNLMQTDL SVWGMYQHAD IVVKCVMIGL ILASVVTWAI FFSKSVEFFT QKRRLKREQL 
QLADARSLDQ ASDIAAGFSA KSLSAQLINE AQNELELSQG SEDNEGIKER TGFRLERRVA
AVGRYMGRGN GYLATIGAIS PFVGLFGTVW GIMNSFIGIA QTQTTNLAVV APGIAEALLA
TAIGLVAAIP AVVIYNIFAR QIGSYKATLG DVAAQVLLLQ SRDLDLNASA SAQPVRAAQK
LRVG