Gene SeD_A3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3483 
Symbol 
ID6872976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3347679 
End bp3348737 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content43% 
IMG OID642786477 
Productputative methyl-accepting chemotaxis protein 
Protein accessionYP_002217114 
Protein GI198244019 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA AAGTATTAGG CTTGCGCCAC TGGAATAATA ATGTTGTAAA AATACCGCCG 
CCAGCAGCAG AATCTGGCGC TAATGCGTCT GACGTGGTGG TGGATACTCC TGAGCCTTAT
GAGCGGATAC TGTGTCAAAA AATTCTGATG GGGATCTCGA CGATCGATAT CATTCGTAAT
GCCATCATTA AGTCCTGTGA GCAGCTCAAC ATTGAAAAAG AACGCATTAA TGAACTTAAC
GAACAGAATG ATAAAGCCAG AAGTTCATTA AAATCGCTCG TGGAATTTAT CACCGAAATT
GGCACGACTT CATCGGATAT TGGCTGTCGT ATGGGCGACT TAAATACCTC CTTAACGCAA
ATTAATGCGT GTATTAAAGA GATACAGAAG ATCGCTAACC AGACCAATTT GATAGCGATT
AACTCCGCGA TCGAGGCCGC GCGCGTAGGG GATGCCGGGC GTGGTTTTAG CGTTATTTCG
AAAGAAGTGA AAAACCTGTC CGAAGATGTT AAACACAGTT CGAAAAGCGT CAGTACGTTA
ACCTCTGTAA TCAAAGATAA TACGGCCAGA GTGAGTGAGG TGCTGGATAA CCAACAGCCG
GTTATTGATA ATATTACGAC TAACATAAAT CAAATTGTGG AGTCTATTGG CATCGTCATC
GATAAATCGC TGAGCATGAA ATCGGTCATG CAGTACATCT CTACGGTGCA GTTTTTGAAT
ATTGTCAAAG TTGACCATGT TATCTGGAAA ATGGAAGTCT ACAAATTACT CTTAAATAAA
GACATAAACA GTAAAATAAC GATGCACGAT CAGTGTCGGC TGGGGAAATG GTACTACGGC
TTTGAAGGAC AGCAGTTTAG CAATTACTAC AGTTTCCGTA GTCTGGAAGC GCCGCATAAA
GAGGTGCATA CCGCTGGTCA CTCTGCGCTG AACTATTTTG CCGCAGGCGA TATGAATGCT
ATGTCGCAAG AACTCGACAG AATGGAGCGA TCCAGTAATG AGGTGGTTAA CCAGCTGGAA
ATGCTGGCTG TCGATTTGTT AAAAGAAACC ACACTGTGA
 
Protein sequence
MFKKVLGLRH WNNNVVKIPP PAAESGANAS DVVVDTPEPY ERILCQKILM GISTIDIIRN 
AIIKSCEQLN IEKERINELN EQNDKARSSL KSLVEFITEI GTTSSDIGCR MGDLNTSLTQ
INACIKEIQK IANQTNLIAI NSAIEAARVG DAGRGFSVIS KEVKNLSEDV KHSSKSVSTL
TSVIKDNTAR VSEVLDNQQP VIDNITTNIN QIVESIGIVI DKSLSMKSVM QYISTVQFLN
IVKVDHVIWK MEVYKLLLNK DINSKITMHD QCRLGKWYYG FEGQQFSNYY SFRSLEAPHK
EVHTAGHSAL NYFAAGDMNA MSQELDRMER SSNEVVNQLE MLAVDLLKET TL