| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3476 |
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| Symbol | |
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| ID | 6870977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3338034 |
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| End bp | 3338519 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642786470 |
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| Product | hypothetical protein |
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| Protein accession | YP_002217107 |
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| Protein GI | 198243473 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.669725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGA TTTTTTTAAA GCTCGACAAT ATCAAAGGCG AAAGCCAGGT TGAAGGCTTT
GAAGATCAGA TAGAGATCAT GTCTTATAGC CACAATGTGG CAATGCAGGT AAATAACGAT
GTTAGCCTCA CTGAGCGGAC TTCCGGGCGC GCGCATGTTG GTGAAATGTC GCTCACCAAA
TTTGTCGACC TCGCCACGCC TGTGCTCAAT GAGTACTGCT GTAGCGGGAG GCTAATTAGA
ACCGCGGTGC TGACGTTGTG CCGCAATGAC GACGGCAAAA TGCGGTCGCT TATCGTTTAT
ACCCTGACAA ACGTGCTGAT ATCACAACTC AGTGTTAGCG GCGGCGCCGG CGGTAAGCCG
GTGGAAACGA TGTCGCTGAA CTTCACGAAA ATCGAATGGC AAATCACTGC CGAGAAATCA
GACGGCGCTC AGCAGGAGTC CAGAACGTCA GTATGGGATC TGGCGATGGA CCAGATAGGG
AAATGA
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| Protein sequence | MDAIFLKLDN IKGESQVEGF EDQIEIMSYS HNVAMQVNND VSLTERTSGR AHVGEMSLTK
FVDLATPVLN EYCCSGRLIR TAVLTLCRND DGKMRSLIVY TLTNVLISQL SVSGGAGGKP
VETMSLNFTK IEWQITAEKS DGAQQESRTS VWDLAMDQIG K
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