Gene SeD_A3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3413 
Symbol 
ID6872142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3280390 
End bp3280815 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content56% 
IMG OID642786411 
Producthypothetical protein 
Protein accessionYP_002217049 
Protein GI198246107 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.539764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.100868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAT CTCACCACAA TGCCTCTACA GCGCGCTTTT ACGCGCTTCG TCTGCTTCCC 
GGCCAGGAAG TGTTTTCCCA ATTACACGCC TTTGTGCAAC AGAACCAATT ACATGCCGCC
TGGATTGCAG GGTGTACCGG CAGTCTGACC GACGTTGCGC TGCGTTATGC CGGGCAAGAA
GCGACCACAT CGCTCACCGG CACGTTTGAA GTTATCTCGC TAAACGGCAC GCTTGAATTG
ACCGGCGAGC ATCTGCATCT CGCGGTATCG GATCCCTACG GGGCCATGCT CGGCGGCCAT
ATGATGCCAG GGTGTACCGT GCGTACCACG CTGGAACTGG TTATCGGCGA GCTGCCAGCG
CTGACGTTCA GCCGTCAACC GTGCGCCATT TCCGGTTATG ACGAACTGCA TATTTCTTCC
CGTTAA
 
Protein sequence
MTVSHHNAST ARFYALRLLP GQEVFSQLHA FVQQNQLHAA WIAGCTGSLT DVALRYAGQE 
ATTSLTGTFE VISLNGTLEL TGEHLHLAVS DPYGAMLGGH MMPGCTVRTT LELVIGELPA
LTFSRQPCAI SGYDELHISS R