Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3413 |
Symbol | |
ID | 6872142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3280390 |
End bp | 3280815 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786411 |
Product | hypothetical protein |
Protein accession | YP_002217049 |
Protein GI | 198246107 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.539764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.100868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTAT CTCACCACAA TGCCTCTACA GCGCGCTTTT ACGCGCTTCG TCTGCTTCCC GGCCAGGAAG TGTTTTCCCA ATTACACGCC TTTGTGCAAC AGAACCAATT ACATGCCGCC TGGATTGCAG GGTGTACCGG CAGTCTGACC GACGTTGCGC TGCGTTATGC CGGGCAAGAA GCGACCACAT CGCTCACCGG CACGTTTGAA GTTATCTCGC TAAACGGCAC GCTTGAATTG ACCGGCGAGC ATCTGCATCT CGCGGTATCG GATCCCTACG GGGCCATGCT CGGCGGCCAT ATGATGCCAG GGTGTACCGT GCGTACCACG CTGGAACTGG TTATCGGCGA GCTGCCAGCG CTGACGTTCA GCCGTCAACC GTGCGCCATT TCCGGTTATG ACGAACTGCA TATTTCTTCC CGTTAA
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Protein sequence | MTVSHHNAST ARFYALRLLP GQEVFSQLHA FVQQNQLHAA WIAGCTGSLT DVALRYAGQE ATTSLTGTFE VISLNGTLEL TGEHLHLAVS DPYGAMLGGH MMPGCTVRTT LELVIGELPA LTFSRQPCAI SGYDELHISS R
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