Gene SeD_A3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3412 
Symbolepd 
ID6872207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3278970 
End bp3280016 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID642786410 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_002217048 
Protein GI198242863 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.213491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC GCATAGCGAT TAATGGCTTT GGTCGCATCG GACGTAACGT GGTTCGTGCT 
TTGTATGAAT CCGGACGTCG CGCGGAAATT ACCGTGGTGG CCATCAACGA GCTGGCGGAT 
GCCGCAGGCA TGGCGCATTT GTTGAAATAC GATACCAGCC ACGGGCGTTT TGCATGGGAG 
GTTCGCCACG AGCGCGAGCA GCTTTTTGTC GGCGACGACG TCATTCGTAT TCTGCATGAA 
CGAACGCTGG CGGATCTGCC GTGGCGCGAA CTGGGCGTGG ATGTCGTGTT GGATTGTACG 
GGCGTATATG GCAACCGGGA GCATGGCGAG GCGCATATTG CCGCTGGCGC GAAGAAAGTG 
CTCTTTTCTC ATCCGGGCAG CAACGATCTT GACGCCACCG TCGTTTTTGG CGTGAACCAG 
AATGAACTGC GTGCGGAACA TCGTATTGTC TCAAACGCAT CCTGTACCAC GAATTGCATA 
ATTCCCGTCA TTAAATTGTT GGATGATGCT TACGGCATCG AGTCTGGTAC CGTCACGACG 
ATCCACTCCG CGATGAACGA TCAGCAGGTG ATCGACGCGT ATCACTCCGA TCTGCGGCGC 
ACGCGCGCGG CCAGCCAGTC GATTATCCCG GTAGATACAA AACTGGCGGC AGGCATTACG 
CGTATATTCC CGCAGTTTAA CGACCGTTTT GAGGCGATTG CCGTGCGCGT TCCAACCATT 
AATGTGACGG CGATCGATTT AAGCGTAACG GTGAAAAAAC CAGTAAAAGC CAGTGAAGTC 
AACCAGTTGC TGCAAAAAGC AGCACAAGGT GCATTTCATG GTATAGTTGA CTATACGGAA 
TCACCGTTGG TCTCGATAGA TTTTAACCAC GACCCGCACA GCGCCATTGT TGATGGCACG 
CAAACCCGGG TTAGTGGCGC CCACCTGATC AAGACGCTGG TCTGGTGCGA TAATGAATGG 
GGCTTTGCTA ACCGGATGCT CGACACCACG TTAGCGATGG CCGCAGTTGG TTTCAGGCTC 
GACGCGTCAG CGTCGACAAA ACTTTAA
 
Protein sequence
MTVRIAINGF GRIGRNVVRA LYESGRRAEI TVVAINELAD AAGMAHLLKY DTSHGRFAWE 
VRHEREQLFV GDDVIRILHE RTLADLPWRE LGVDVVLDCT GVYGNREHGE AHIAAGAKKV 
LFSHPGSNDL DATVVFGVNQ NELRAEHRIV SNASCTTNCI IPVIKLLDDA YGIESGTVTT 
IHSAMNDQQV IDAYHSDLRR TRAASQSIIP VDTKLAAGIT RIFPQFNDRF EAIAVRVPTI 
NVTAIDLSVT VKKPVKASEV NQLLQKAAQG AFHGIVDYTE SPLVSIDFNH DPHSAIVDGT 
QTRVSGAHLI KTLVWCDNEW GFANRMLDTT LAMAAVGFRL DASASTKL