Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3395 |
Symbol | ubiH |
ID | 6871699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3265551 |
End bp | 3266729 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642786398 |
Product | 2-octaprenyl-6-methoxyphenyl hydroxylase |
Protein accession | YP_002217036 |
Protein GI | 198241802 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0451954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCA TTATCGTTGG CGGCGGCATG GCAGGCGCAA CGCTGGCGCT GGCCATCTCT CAGTTCAGTC ATGGGACGTT GCCGGTACAC CTGATTGAAG CGAAAGCGCC TGAAGCCGAC GGTCATCCCG GCTTTGACGC CAGAGCGATT GCGCTGGCGG CGGGCACTTG CCAGCAACTG GCGCGAATTG GCGTCTGGCA GGCGATTTCC GATTGCGCAA CGGCAATCAA CACCGTACAC GTCAGCGATC GCGGTCATGT CGGATTTGTG ACTCTCGACG CGCAGGATTA CAGCCTGGCA GCGTTGGGTC ACGTTGCGGA GCTGCATGAT ATCGGGCTGC GTCTGTTTGC GCTCTTGCGT AAAGCGCCAG GCGTTACGCT GCACTGCCCG GAGCGCGTAG CCAGCGTGTC GCGTACCCAA CAGCAAGTTA ACGTCACTCT GGAAAACGGC AATGTGATAG CTGGCAGCGT GCTGGTGGCG GCTAACGGTA CCCACTCTGC GCTGGCGTCA GCCTGCGGCG TTGACTGGCA TCAGGAGCCT TACGAACAGT TAGCGGTGAT AGCGAATGTC GCGACCGCTA TCCCGCATCA GGGACGCGCC TTTGAACGTT TTACTCCCAA TGGCCCGCTG GCGATGTTGC CGATGTCGCA TGGCCGATGT TCGCTGGTTT GGTGTCACCC ACTCGACCAG CGCGATGAGG TGCTGAGCTG GTCCGACGCG CAGTTCTGCC ATGCATTGCA GGCCGCGTTC GGCTGGCGGC TGGGGCGAAT TACTCAGGCC GGTAAGCGCA GCGTGTATCC GCTTGCCCTG ACTACGGCGG CAAAAGTGTT TACTCACCGG ACTGTCATGG TCGGCAATGC GGCGCAGACG TTGCATCCTA TCGCCGGACA AGGGTTTAAT CTCGGTCTGC GCGATGTCAT GAGCCTGGCG GAAACGCTGA TCGCGGCACA GGACGCGGGC GAGGATATTG GCGCCTGGCA CGTGTTATCG CGCTATCAGC AGCGTCGTCA GGTTGACCGG GATACGACGA TTGGCGTAAC GAACGGTCTG GTCCATCTGT TTGCAAATCG TTGGGCGCCG CTGGTTATTG GGCGCAATAT CGGTTTAATG GCGATGGAAT TATTACCGCC TGCGCGCGAT GCGCTGGCAC AGCGGACCTT AGGTTGGGTT GCGCGTTAA
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Protein sequence | MSVIIVGGGM AGATLALAIS QFSHGTLPVH LIEAKAPEAD GHPGFDARAI ALAAGTCQQL ARIGVWQAIS DCATAINTVH VSDRGHVGFV TLDAQDYSLA ALGHVAELHD IGLRLFALLR KAPGVTLHCP ERVASVSRTQ QQVNVTLENG NVIAGSVLVA ANGTHSALAS ACGVDWHQEP YEQLAVIANV ATAIPHQGRA FERFTPNGPL AMLPMSHGRC SLVWCHPLDQ RDEVLSWSDA QFCHALQAAF GWRLGRITQA GKRSVYPLAL TTAAKVFTHR TVMVGNAAQT LHPIAGQGFN LGLRDVMSLA ETLIAAQDAG EDIGAWHVLS RYQQRRQVDR DTTIGVTNGL VHLFANRWAP LVIGRNIGLM AMELLPPARD ALAQRTLGWV AR
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