Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3376 |
Symbol | lysS |
ID | 6871333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3246307 |
End bp | 3247824 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642786380 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_002217018 |
Protein GI | 198242473 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAC AAAACGCACA GGGCGCTGAC GAGGTAGTCG ATCTTAACAA TGAAATGAAG GCACGTCGCG AGAAGCTGGC TGCACTGCGT GAGCAGGGTA TCCCGTTCCC GAACGATTTC CGTCGTGACC GTACCTCAGA CCAACTGCAC GCAGAGTTTG ACGCGAAAGA AGCTGAAGAA CTGGAAGCGC TGAATATTGA AGTGTCCGTC GCGGGCCGTA TGATGACTCG CCGTATTATG GGTAAAGCCT CTTTTGTTAC CCTGCAAGAC GTAGGCGGCC GCATTCAGCT GTATGTGGCG CGCGATGATC TGCCGGAAGG CGTTTACAAC GAGCAGTTCA AGAAGTGGGA TCTTGGCGAT ATCCTCGGCG CGAAAGGTAA GCTGTTCAAA ACCAAAACCG GCGAGCTGTC TATCCACTGC ACCGAACTGC GCCTGCTGAC GAAAGCGCTG CGTCCGTTGC CGGATAAATT CCACGGCCTG CAGGACCAGG AAGCGCGCTA TCGCCAGCGT TATCTGGATC TCATCTCTAA CGATGAATCC CGTAACACCT TCAAAACCCG TTCGAAGATC CTGGCTGGTA TTCGCCAGTT TATGGTTGCT CGCGGCTTTA TGGAAGTCGA AACGCCGATG ATGCAGGTGA TCCCAGGCGG CGCGTCTGCC CGTCCGTTTA TCACCCATCA CAACGCGCTG GATCTGGACA TGTACCTGCG TATCGCGCCG GAACTGTACC TCAAGCGTCT GGTGGTTGGC GGCTTCGAAC GCGTATTCGA AATTAACCGT AACTTCCGTA ACGAAGGCAT CTCCGTGCGC CATAATCCTG AGTTCACCAT GATGGAACTC TATATGGCGT ATGCGGACTA CAAAGACCTG ATCGAGCTGA CTGAGTCTCT GTTCCGTACG CTGGCGCAGG ATGTTCTGGG CACCACCCAG GTTCCGTACG GTGATGAAGT GTTTGACTTC GGTAAGCCGT TCGAAAAACT GACCATGCGT GAAGCGATCA AGAAATATCG TCCGGAAACA GATATGGCTG ATCTGGACAA CTTCGATTCC GCGAAGGCGA TTGCTGAAAG CATCGGCATT CACGTCGAGA AGAGCTGGGG TCTGGGCCGT ATCGTCACCG AGATCTTTGA CGAAGTCGCT GAAGCGCATC TGATTCAGCC GACCTTCATC ACCGAATATC CGGCTGAAGT GTCTCCACTG GCGCGTCGTA ATGATGTGAA CCCGGAAATC ACTGACCGCT TCGAGTTCTT TATCGGCGGT CGTGAAATCG GCAATGGCTT TAGCGAGTTG AACGATGCGG AAGACCAGGC GCAGCGTTTC CTGGATCAGG TTAATGCAAA AGCGGCGGGC GACGACGAAG CCATGTTCTA CGACGAAGAC TACGTGACGG CGCTGGAACA CGGGTTACCG CCGACAGCGG GTCTGGGAAT TGGTATCGAC CGTATGGTGA TGCTGTTTAC TAACAGCCAC ACGATTCGCG ACGTTATTCT GTTCCCGGCG ATGCGTCCGG TGAAATAA
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Protein sequence | MSEQNAQGAD EVVDLNNEMK ARREKLAALR EQGIPFPNDF RRDRTSDQLH AEFDAKEAEE LEALNIEVSV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDDLPEGVYN EQFKKWDLGD ILGAKGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEARYRQR YLDLISNDES RNTFKTRSKI LAGIRQFMVA RGFMEVETPM MQVIPGGASA RPFITHHNAL DLDMYLRIAP ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYKDL IELTESLFRT LAQDVLGTTQ VPYGDEVFDF GKPFEKLTMR EAIKKYRPET DMADLDNFDS AKAIAESIGI HVEKSWGLGR IVTEIFDEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG REIGNGFSEL NDAEDQAQRF LDQVNAKAAG DDEAMFYDED YVTALEHGLP PTAGLGIGID RMVMLFTNSH TIRDVILFPA MRPVK
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