| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3375 |
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| Symbol | idi |
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| ID | 6872782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3245686 |
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| End bp | 3246231 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642786379 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_002217017 |
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| Protein GI | 198242102 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.923272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGG AACATGTCGT TTTATTGGAT GAGCAGGATA AGCCTTCCGG CACACTGGAA
AAGTATGCGG CTCATACGCT TAATACGCCT TTGCATCTGG CTTTCTCCTG CTGGCTATTT
AACGAAGATG GCCAGTTGCT GGTAACACGA CGGTCGCTGA GCAAGAAAGC CTGGCCAGGC
GTGTGGACGA ATTCGGTTTG CGGTCATCCG CAACAAGGCG AAACCACCGA AGAGGCGATC
ATCCGCCGTT GTCGGTTCGA ACTCGGCGTG GAAATTACCG ATCTCACCCC CGTCTATCCG
CACTTCAGCT ATCGAGCGAC AGATCCAAAC GGTATTGTGG AAAATGAAGT CTGTCCGGTA
TTTGCCGCGC GGGCAACCAG TGTGTTACAG GTTAACAGCG AAGAGGTGAT GGACTATCAG
TGGAGCGAAT TTAAAAGCGT ATGGAAAAGC CTTCTCGCTA CGCCGTGGGC ATTTAGCCCG
TGGATGGTCA TGCAAGCGTC AGACGAACAA GCGCGTGAAC GACTGCTCAA TTACTGCCAG
CGTTAA
|
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| Protein sequence | MTEEHVVLLD EQDKPSGTLE KYAAHTLNTP LHLAFSCWLF NEDGQLLVTR RSLSKKAWPG
VWTNSVCGHP QQGETTEEAI IRRCRFELGV EITDLTPVYP HFSYRATDPN GIVENEVCPV
FAARATSVLQ VNSEEVMDYQ WSEFKSVWKS LLATPWAFSP WMVMQASDEQ ARERLLNYCQ
R
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